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    TRAPPC13 trafficking protein particle complex subunit 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696521, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAPPC13provided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 13provided by VGNC
    Primary source
    VGNC:VGNC:79549
    See related
    Ensembl:ENSMMUG00000016519
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C6H5orf44
    Orthologs
    human mouse all
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    Genomic context

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    See TRAPPC13 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (64192859..64234750)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (63793631..63837533)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene shieldin complex subunit 3 Neighboring gene tripartite motif containing 23 Neighboring gene small glutamine rich tetratricopeptide repeat co-chaperone beta Neighboring gene neurolysin Neighboring gene erbb2 interacting protein Neighboring gene U6 snRNA-associated Sm-like protein LSm8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of TRAPPIII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 13
    Names
    trafficking protein particle complex 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266356.1 → NP_001253285.1  trafficking protein particle complex subunit 13

      See identical proteins and their annotated locations for NP_001253285.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044090
      UniProtKB/TrEMBL
      G7MU67, H9Z078
      Conserved Domains (1) summary
      pfam06159
      Location:65 → 298
      DUF974; Protein of unknown function (DUF974)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      64192859..64234750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140115.2 → XP_014995601.1  trafficking protein particle complex subunit 13 isoform X2

      UniProtKB/TrEMBL
      G7MU67, H9G007
      Conserved Domains (1) summary
      pfam06159
      Location:65 → 292
      DUF974; Protein of unknown function (DUF974)

    2. XM_015140116.2 → XP_014995602.1  trafficking protein particle complex subunit 13 isoform X3

      UniProtKB/TrEMBL
      G7MU67, H9Z077
      Conserved Domains (1) summary
      pfam06159
      Location:65 → 292
      DUF974; Protein of unknown function (DUF974)

    3. XM_015140114.2 → XP_014995600.1  trafficking protein particle complex subunit 13 isoform X1

      UniProtKB/TrEMBL
      F6WE11, G7MU67, H9G006
      Related
      ENSMMUP00000021709.4, ENSMMUT00000023204.4
      Conserved Domains (1) summary
      pfam06159
      Location:65 → 298
      DUF974; Protein of unknown function (DUF974)

    4. XM_015140118.2 → XP_014995604.1  trafficking protein particle complex subunit 13 isoform X5

      Conserved Domains (1) summary
      pfam06159
      Location:65 → 297
      DUF974; Protein of unknown function (DUF974)

    5. XM_015140117.2 → XP_014995603.1  trafficking protein particle complex subunit 13 isoform X4

      UniProtKB/TrEMBL
      G7MU67
      Conserved Domains (1) summary
      pfam06159
      Location:50 → 282
      DUF974; Protein of unknown function (DUF974)
    Nucleotide Protein
    Heading Accession and Version

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