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    CCIN calicin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693791, updated on 17-Aug-2024

    Summary

    Official Symbol
    CCINprovided by VGNC
    Official Full Name
    calicinprovided by VGNC
    Primary source
    VGNC:VGNC:70715
    See related
    Ensembl:ENSMMUG00000010214
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See CCIN in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (47980432..47982815, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (48002254..48004221, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase Neighboring gene clathrin light chain A Neighboring gene GLI pathogenesis related 2 Neighboring gene reversion inducing cysteine rich protein with kazal motifs

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001198698.1NP_001185627.1  calicin

      Status: INFERRED

      Source sequence(s)
      QNVO02000140
      UniProtKB/TrEMBL
      F7HIY6
      Related
      ENSMMUP00000039489.1, ENSMMUT00000014263.4
      Conserved Domains (5) summary
      PHA03098
      Location:41452
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:317362
      Kelch; KELCH repeat [structural motif]
      pfam13418
      Location:515568
      Kelch_4; Galactose oxidase, central domain
      cd18307
      Location:27123
      BTB_POZ_calicin; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in calicin
      cl28903
      Location:130208
      BACK; BACK (BTB and C-terminal Kelch) domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      47980432..47982815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834210.1XP_028690043.1  calicin isoform X2

      Conserved Domains (4) summary
      PHA03098
      Location:41422
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:317362
      Kelch; KELCH repeat [structural motif]
      cd18307
      Location:27123
      BTB_POZ_calicin; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in calicin
      cl28903
      Location:130208
      BACK; BACK (BTB and C-terminal Kelch) domain
    2. XM_028834209.1XP_028690042.1  calicin isoform X1

      UniProtKB/TrEMBL
      F7HIY6
      Conserved Domains (5) summary
      PHA03098
      Location:41452
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:317362
      Kelch; KELCH repeat [structural motif]
      pfam13418
      Location:515568
      Kelch_4; Galactose oxidase, central domain
      cd18307
      Location:27123
      BTB_POZ_calicin; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in calicin
      cl28903
      Location:130208
      BACK; BACK (BTB and C-terminal Kelch) domain