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    YARS1 tyrosyl-tRNA synthetase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709003, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YARS1provided by VGNC
    Official Full Name
    tyrosyl-tRNA synthetase 1provided by VGNC
    Primary source
    VGNC:VGNC:78816
    Locus tag
    EGK_00518
    See related
    Ensembl:ENSMMUG00000019746
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    YARS
    Orthologs
    human mouse all
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    Genomic context

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    See YARS1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (191828845..191873228)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (31856521..31900779, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673136 Neighboring gene fibronectin type III domain containing 5 Neighboring gene S100P binding protein Neighboring gene NHS like 3 Neighboring gene syncoilin, intermediate filament protein Neighboring gene RB binding protein 4, chromatin remodeling factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tyrosine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tyrosyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine--tRNA ligase, cytoplasmic
    Names
    tyrosyl-tRNA synthetase, cytoplasmic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      191828845..191873228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134550.2 → XP_014990036.1  tyrosine--tRNA ligase, cytoplasmic isoform X1

      UniProtKB/TrEMBL
      A0A5F8ALC8, A0A8J8YEF9, F7AYH4, G7MI96, H9ETF1
      Related
      ENSMMUP00000078203.1, ENSMMUT00000090664.1
      Conserved Domains (2) summary
      PLN02610
      Location:327 → 528
      PLN02610; probable methionyl-tRNA synthetase
      cl00015
      Location:8 → 328
      nt_trans; nucleotidyl transferase superfamily

    2. XM_028836407.1 → XP_028692240.1  tyrosine--tRNA ligase, cytoplasmic isoform X2

      UniProtKB/TrEMBL
      A0A5F8ALC8
      Conserved Domains (2) summary
      PLN02610
      Location:272 → 473
      PLN02610; probable methionyl-tRNA synthetase
      cl00015
      Location:1 → 273
      nt_trans; nucleotidyl transferase superfamily

    3. XM_028836408.1 → XP_028692241.1  tyrosine--tRNA ligase, cytoplasmic isoform X2

      UniProtKB/TrEMBL
      A0A5F8ALC8
      Conserved Domains (2) summary
      PLN02610
      Location:272 → 473
      PLN02610; probable methionyl-tRNA synthetase
      cl00015
      Location:1 → 273
      nt_trans; nucleotidyl transferase superfamily
    Nucleotide Protein
    Heading Accession and Version

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