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    JAML junction adhesion molecule like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704919, updated on 17-Aug-2024

    Summary

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    Official Symbol
    JAMLprovided by VGNC
    Official Full Name
    junction adhesion molecule likeprovided by VGNC
    Primary source
    VGNC:VGNC:73860
    Locus tag
    EGK_06947
    See related
    Ensembl:ENSMMUG00000006268
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    AMICA1
    Orthologs
    human mouse all
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    Genomic context

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    See JAML in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (111248607..111283199, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (111026184..111060779, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel beta subunit 4 Neighboring gene sodium voltage-gated channel beta subunit 2 Neighboring gene myelin protein zero like 3 Neighboring gene uncharacterized LOC106993497 Neighboring gene myelin protein zero like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell adhesion molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monocyte extravasation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neutrophil extravasation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    junctional adhesion molecule-like
    Names
    adhesion molecule, interacts with CXADR antigen 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261678.1 → NP_001248607.1  junctional adhesion molecule-like precursor

      See identical proteins and their annotated locations for NP_001248607.1

      Status: PROVISIONAL

      Source sequence(s)
      JU474267
      UniProtKB/TrEMBL
      A0A1D5RE95, A0A5F7Z9B9, A0A8J8Y5V2, G7NCB6
      Related
      ENSMMUP00000062149.1, ENSMMUT00000093666.1
      Conserved Domains (2) summary
      pfam07686
      Location:26 → 136
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:28 → 34
      Ig; Ig strand A' [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      111248607..111283199 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015115807.2 → XP_014971293.1  junctional adhesion molecule-like isoform X1

      UniProtKB/TrEMBL
      A0A1D5QXJ9, A0A1D5RE95, F7H306
      Related
      ENSMMUP00000052779.2, ENSMMUT00000054413.2
      Conserved Domains (3) summary
      smart00410
      Location:189 → 300
      IG_like; Immunoglobulin like
      pfam07686
      Location:75 → 185
      V-set; Immunoglobulin V-set domain
      cl11960
      Location:189 → 285
      Ig; Immunoglobulin domain

    2. XM_028832626.1 → XP_028688459.1  junctional adhesion molecule-like isoform X2

      UniProtKB/TrEMBL
      A0A1D5RE95
      Conserved Domains (1) summary
      pfam07686
      Location:75 → 185
      V-set; Immunoglobulin V-set domain
    Nucleotide Protein
    Heading Accession and Version

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