U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TSC22D1 TSC22 domain family member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701076, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TSC22D1provided by VGNC
    Official Full Name
    TSC22 domain family member 1provided by VGNC
    Primary source
    VGNC:VGNC:79053
    See related
    Ensembl:ENSMMUG00000003753
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TSC22D1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (22985172..23129950, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (23620112..23766368, complement)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673424 Neighboring gene uncharacterized LOC114673475 Neighboring gene microRNA mir-7169 Neighboring gene translation initiation factor IF-2-like Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 pseudogene Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    TSC22 domain family protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      22985172..23129950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121004.2 → XP_014976490.2  TSC22 domain family protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RDM4, H9ZEV3
      Related
      ENSMMUP00000058417.2, ENSMMUT00000062014.2
      Conserved Domains (3) summary
      PHA03247
      Location:571 → 921
      PHA03247; large tegument protein UL36; Provisional
      PRK10811
      Location:678 → 842
      rne; ribonuclease E; Reviewed
      pfam01166
      Location:981 → 1027
      TSC22; TSC-22/dip/bun family

    2. XM_015121007.2 → XP_014976493.1  TSC22 domain family protein 1 isoform X4

      Conserved Domains (1) summary
      cl40461
      Location:1 → 74
      ZIP_TSC22D-like; leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins

    3. XM_015121008.2 → XP_014976494.1  TSC22 domain family protein 1 isoform X4

      Conserved Domains (1) summary
      cl40461
      Location:1 → 74
      ZIP_TSC22D-like; leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins

    4. XM_015121006.2 → XP_014976492.1  TSC22 domain family protein 1 isoform X3

      UniProtKB/TrEMBL
      H9YY78
      Related
      ENSMMUP00000071088.1, ENSMMUT00000096392.1
      Conserved Domains (1) summary
      cd21938
      Location:54 → 132
      ZIP_TSC22D1; leucine zipper domain found in TSC22 domain family protein 1

    5. XM_028837297.1 → XP_028693130.1  TSC22 domain family protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QG15
      Conserved Domains (2) summary
      PHA03247
      Location:571 → 921
      PHA03247; large tegument protein UL36; Provisional
      PRK10811
      Location:678 → 842
      rne; ribonuclease E; Reviewed

    RNA

    1. XR_001440752.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.