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    GYPC glycophorin C (Gerbich blood group) [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712092, updated on 5-Mar-2024

    Summary

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    Gene symbol
    GYPC
    Gene description
    glycophorin C (Gerbich blood group)
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GYPC in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (4189760..4266225, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (3961257..4006390, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S29 pseudogene Neighboring gene testis expressed 51 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114671498 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cortical cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycophorin-C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      4189760..4266225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830630.1 → XP_028686463.1  glycophorin-C isoform X2

    2. XM_028830631.1 → XP_028686464.1  glycophorin-C isoform X4

      Conserved Domains (1) summary
      smart00294
      Location:91 → 106
      4.1m; putative band 4.1 homologues' binding motif

    3. XM_015109882.2 → XP_014965368.1  glycophorin-C isoform X3

      Conserved Domains (1) summary
      smart00294
      Location:91 → 106
      4.1m; putative band 4.1 homologues' binding motif

    4. XM_028830629.1 → XP_028686462.1  glycophorin-C isoform X1

      Conserved Domains (1) summary
      smart00294
      Location:127 → 142
      4.1m; putative band 4.1 homologues' binding motif
    Nucleotide Protein
    Heading Accession and Version

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