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    ELL3 elongation factor for RNA polymerase II 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711271, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ELL3provided by VGNC
    Official Full Name
    elongation factor for RNA polymerase II 3provided by VGNC
    Primary source
    VGNC:VGNC:72087
    Locus tag
    EGK_17433
    See related
    Ensembl:ENSMMUG00000001683
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ELL3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (20255326..20260971, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (20124572..20129809, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene cation channel sperm-associated protein 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein disulfide isomerase family A member 3 Neighboring gene small EDRK-rich factor 2 Neighboring gene serine incorporator 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in snRNA transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription elongation factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase II elongation factor ELL3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      20255326..20260971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850858.1 → XP_028706691.1  RNA polymerase II elongation factor ELL3 isoform X2

      Conserved Domains (1) summary
      pfam07303
      Location:403 → 503
      Occludin_ELL; Occludin homology domain

    2. XM_015142102.2 → XP_014997588.2  RNA polymerase II elongation factor ELL3 isoform X3

      UniProtKB/TrEMBL
      F7G398
      Related
      ENSMMUP00000002256.4, ENSMMUT00000002385.4
      Conserved Domains (2) summary
      pfam07303
      Location:293 → 393
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:23 → 118
      ELL; RNA polymerase II elongation factor ELL

    3. XM_028850857.1 → XP_028706690.1  RNA polymerase II elongation factor ELL3 isoform X1

      Conserved Domains (1) summary
      pfam07303
      Location:411 → 511
      Occludin_ELL; Occludin homology domain
    Nucleotide Protein
    Heading Accession and Version

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