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    TRIM4 tripartite motif containing 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709962, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRIM4provided by VGNC
    Official Full Name
    tripartite motif containing 4provided by VGNC
    Primary source
    VGNC:VGNC:79021
    See related
    Ensembl:ENSMMUG00000022502
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See TRIM4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (42066149..42093890, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (125399853..125427295, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 3 subfamily A member 43 Neighboring gene olfactory receptor 2AE1 Neighboring gene uncharacterized LOC106997574 Neighboring gene gap junction protein gamma 3 Neighboring gene alpha-2-glycoprotein 1, zinc-binding

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence Analysis of Macaca mulatta TRIM4 and Its Role in the Interferon Pathway. Zhao M, et al. Front Vet Sci, 2022. PMID 35242838, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM4
    Names
    tripartite motif-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      42066149..42093890 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134414.2 → XP_014989900.2  E3 ubiquitin-protein ligase TRIM4 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QX36, F6YWX6
      Related
      ENSMMUP00000052616.2, ENSMMUT00000064440.2
      Conserved Domains (3) summary
      cd00021
      Location:86 → 123
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      cd15809
      Location:279 → 468
      SPRY_PRY_TRIM4; PRY/SPRY domain in tripartite motif-binding protein 4 (TRIM4), also known as RING finger protein 87 (RNF87)
      cd16590
      Location:9 → 53
      RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins

    2. XM_015134415.2 → XP_014989901.2  E3 ubiquitin-protein ligase TRIM4 isoform X2

      Conserved Domains (2) summary
      cd00021
      Location:86 → 123
      BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
      cd16590
      Location:9 → 53
      RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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