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    SUPV3L1 Suv3 like RNA helicase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712081, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SUPV3L1provided by VGNC
    Official Full Name
    Suv3 like RNA helicaseprovided by VGNC
    Primary source
    VGNC:VGNC:106107
    See related
    Ensembl:ENSMMUG00000052636
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SUPV3L1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (68592296..68622188, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (63249595..63279469, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene hexokinase 1 Neighboring gene hexokinase domain containing 1 Neighboring gene VPS26, retromer complex component A Neighboring gene serglycin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial RNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial degradosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase SUPV3L1, mitochondrial
    Names
    suppressor of var1, 3-like 1
    XP_001110593.2
    XP_015002977.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      68592296..68622188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001110593.4 → XP_001110593.2  ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X1

      UniProtKB/TrEMBL
      G7N2A5, I0FUK2
      Related
      ENSMMUP00000076305.1, ENSMMUT00000085776.1
      Conserved Domains (3) summary
      COG0513
      Location:284 → 501
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd00079
      Location:341 → 487
      HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
      pfam12513
      Location:627 → 673
      SUV3_C; Mitochondrial degradasome RNA helicase subunit C terminal

    2. XM_015147491.2 → XP_015002977.1  ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X2

      UniProtKB/TrEMBL
      G7N2A5
      Conserved Domains (5) summary
      cd18805
      Location:218 → 356
      SF2_C_suv3; C-terminal helicase domain of ATP-dependent RNA helicase
      cd17913
      Location:69 → 214
      DEXQc_Suv3; DEXQ-box helicase domain of Suv3
      pfam12513
      Location:495 → 541
      SUV3_C; Mitochondrial degradasome RNA helicase subunit C terminal
      pfam18114
      Location:1 → 48
      Suv3_N; Suv3 helical N-terminal domain
      pfam18147
      Location:427 → 467
      Suv3_C_1; Suv3 C-terminal domain 1
    Nucleotide Protein
    Heading Accession and Version

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