U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PTX3 pentraxin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704985, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PTX3provided by VGNC
    Official Full Name
    pentraxin 3provided by VGNC
    Primary source
    VGNC:VGNC:110346
    See related
    Ensembl:ENSMMUG00000062582
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PTX3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (59739363..59746035)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (144583619..144590280)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene keratin, type I cytoskeletal 18 pseudogene Neighboring gene cyclin L1 Neighboring gene ventricular zone expressed PH domain containing 1 Neighboring gene solute carrier family 66 member 1 like Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables complement component C1q complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    pentraxin-related protein PTX3
    Names
    pentraxin 3, long
    pentraxin-related gene, rapidly induced by IL-1 beta

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      59739363..59746035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001103515.4 → XP_001103515.2  pentraxin-related protein PTX3

      UniProtKB/TrEMBL
      A0A5F8AKJ2
      Related
      ENSMMUP00000077553.1, ENSMMUT00000092607.1
      Conserved Domains (2) summary
      smart00159
      Location:175 → 381
      PTX; Pentraxin / C-reactive protein / pentaxin family
      COG1196
      Location:55 → 167
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.