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    SHLD2 shieldin complex subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694102, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SHLD2provided by VGNC
    Official Full Name
    shieldin complex subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:106101
    See related
    Ensembl:ENSMMUG00000013439
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM35A
    Orthologs
    human mouse all
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    Genomic context

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    See SHLD2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (50256041..50343915, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (44456600..44520863, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene G protein regulated inducer of neurite outgrowth 2 Neighboring gene synaptotagmin 15 Neighboring gene glutamate dehydrogenase 1 Neighboring gene protein FAM25A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in site of double-strand break IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    shieldin complex subunit 2
    Names
    family with sequence similarity 35 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      50256041..50343915 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028826369.1 → XP_028682202.1  shieldin complex subunit 2 isoform X6

      Conserved Domains (1) summary
      pfam15793
      Location:98 → 269
      FAM35_C; Protein family FAM35, C-terminal

    2. XM_028826367.1 → XP_028682200.1  shieldin complex subunit 2 isoform X4

      UniProtKB/TrEMBL
      F6YPH5
      Conserved Domains (1) summary
      pfam15793
      Location:611 → 783
      FAM35_C; Protein family FAM35, C-terminal

    3. XM_028826365.1 → XP_028682198.1  shieldin complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      F6YPH5
      Conserved Domains (1) summary
      pfam15793
      Location:721 → 800
      FAM35_C; Protein family FAM35, C-terminal

    4. XM_028826364.1 → XP_028682197.1  shieldin complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      F6YPH5
      Conserved Domains (1) summary
      pfam15793
      Location:721 → 893
      FAM35_C; Protein family FAM35, C-terminal

    5. XM_015147056.2 → XP_015002542.2  shieldin complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      F6YPH5
      Related
      ENSMMUP00000017655.3, ENSMMUT00000018854.4
      Conserved Domains (1) summary
      pfam15793
      Location:721 → 893
      FAM35_C; Protein family FAM35, C-terminal

    6. XM_028826368.1 → XP_028682201.1  shieldin complex subunit 2 isoform X5

      Conserved Domains (1) summary
      pfam15793
      Location:240 → 412
      FAM35_C; Protein family FAM35, C-terminal

    7. XM_028826366.1 → XP_028682199.1  shieldin complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      F6YPH5
      Conserved Domains (1) summary
      pfam15793
      Location:721 → 801
      FAM35_C; Protein family FAM35, C-terminal

    RNA

    1. XR_003719325.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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