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    CD48 CD48 molecule [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719762, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD48provided by VGNC
    Official Full Name
    CD48 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:70769
    See related
    Ensembl:ENSMMUG00000015812
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CD48 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (90200634..90216801)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (135461274..135477499, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene SLAM family member 7 Neighboring gene 60S ribosomal protein L36 pseudogene Neighboring gene protein SET-like Neighboring gene signaling lymphocytic activation molecule family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CD48 antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      90200634..90216801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113619.2 → XP_014969105.2  CD48 antigen isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZDL6, F7AH60
      Related
      ENSMMUP00000020779.4, ENSMMUT00000022209.4
      Conserved Domains (2) summary
      pfam13895
      Location:133 → 202
      Ig_2; Immunoglobulin domain
      cd05775
      Location:35 → 128
      Ig_CD2_like_N; N-terminal immunoglobulin (Ig)-like domain of T-cell surface antigen CD2 and similar domains

    2. XM_028826968.1 → XP_028682801.1  CD48 antigen isoform X2

      UniProtKB/TrEMBL
      G7ME77
      Conserved Domains (2) summary
      pfam13895
      Location:133 → 202
      Ig_2; Immunoglobulin domain
      cd05775
      Location:35 → 128
      Ig_CD2_like_N; N-terminal immunoglobulin (Ig)-like domain of T-cell surface antigen CD2 and similar domains

    3. XM_015113628.2 → XP_014969114.1  CD48 antigen isoform X3

      UniProtKB/TrEMBL
      G7ME77
      Conserved Domains (3) summary
      cd05741
      Location:38 → 127
      Ig_CEACAM_D1_like; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) and similar proteins
      smart00410
      Location:32 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:144 → 202
      Ig_2; Immunoglobulin domain

    4. XM_028826977.1 → XP_028682810.1  CD48 antigen isoform X4

      Conserved Domains (2) summary
      pfam13895
      Location:101 → 170
      Ig_2; Immunoglobulin domain
      cd05775
      Location:3 → 96
      Ig_CD2_like_N; N-terminal immunoglobulin (Ig)-like domain of T-cell surface antigen CD2 and similar domains
    Nucleotide Protein
    Heading Accession and Version

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