U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PTPN23 protein tyrosine phosphatase non-receptor type 23 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711601, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PTPN23provided by VGNC
    Official Full Name
    protein tyrosine phosphatase non-receptor type 23provided by VGNC
    Primary source
    VGNC:VGNC:76477
    See related
    Ensembl:ENSMMUG00000014045
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PTPN23 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (103391360..103424710)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (95103275..95137251, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene SET domain containing 2, histone lysine methyltransferase Neighboring gene small nucleolar RNA U13 Neighboring gene kinesin family member 9 Neighboring gene kelch like family member 18 Neighboring gene SREBF chaperone Neighboring gene bolA-like protein 2 pseudogene Neighboring gene elongator acetyltransferase complex subunit 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in early endosome to late endosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytic recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tyrosine-protein phosphatase non-receptor type 23
    XP_014986571.2
    XP_014986573.2
    XP_014986574.2
    XP_028699897.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      103391360..103424710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131085.2 → XP_014986571.2  tyrosine-protein phosphatase non-receptor type 23 isoform X1

      UniProtKB/TrEMBL
      F7ANH2, H9FSM4
      Related
      ENSMMUP00000018455.4, ENSMMUT00000019713.4
      Conserved Domains (4) summary
      cd09234
      Location:362 → 700
      V_HD-PTP_like; Protein-interacting V-domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains
      cd09239
      Location:2 → 357
      BRO1_HD-PTP_like; Protein-interacting, N-terminal, Bro1-like domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains
      PHA03247
      Location:727 → 1076
      PHA03247; large tegument protein UL36; Provisional
      cd14539
      Location:1239 → 1443
      PTP-N23; PTP-like domain of tyrosine-protein phosphatase non-receptor type 23

    2. XM_015131087.2 → XP_014986573.2  tyrosine-protein phosphatase non-receptor type 23 isoform X2

      UniProtKB/TrEMBL
      H9FSM4
      Conserved Domains (4) summary
      cd09234
      Location:279 → 617
      V_HD-PTP_like; Protein-interacting V-domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains
      PHA03247
      Location:644 → 993
      PHA03247; large tegument protein UL36; Provisional
      cd14539
      Location:1156 → 1360
      PTP-N23; PTP-like domain of tyrosine-protein phosphatase non-receptor type 23
      cl14649
      Location:1 → 274
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains

    3. XM_028844064.1 → XP_028699897.1  tyrosine-protein phosphatase non-receptor type 23 isoform X2

      UniProtKB/TrEMBL
      H9FSM4
      Conserved Domains (4) summary
      cd09234
      Location:279 → 617
      V_HD-PTP_like; Protein-interacting V-domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains
      PHA03247
      Location:644 → 993
      PHA03247; large tegument protein UL36; Provisional
      cd14539
      Location:1156 → 1360
      PTP-N23; PTP-like domain of tyrosine-protein phosphatase non-receptor type 23
      cl14649
      Location:1 → 274
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains

    4. XM_015131088.2 → XP_014986574.2  tyrosine-protein phosphatase non-receptor type 23 isoform X2

      UniProtKB/TrEMBL
      H9FSM4
      Conserved Domains (4) summary
      cd09234
      Location:279 → 617
      V_HD-PTP_like; Protein-interacting V-domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains
      PHA03247
      Location:644 → 993
      PHA03247; large tegument protein UL36; Provisional
      cd14539
      Location:1156 → 1360
      PTP-N23; PTP-like domain of tyrosine-protein phosphatase non-receptor type 23
      cl14649
      Location:1 → 274
      BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials