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    GSDME gasdermin E [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703441, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GSDMEprovided by VGNC
    Official Full Name
    gasdermin Eprovided by VGNC
    Primary source
    VGNC:VGNC:73249
    See related
    Ensembl:ENSMMUG00000016938
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    DFNA5
    Orthologs
    human mouse all
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    Genomic context

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    See GSDME in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (90388273..90448377)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (83461892..83522327)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene cytochrome c, somatic Neighboring gene oxysterol binding protein like 3 Neighboring gene protein associated with LIN7 2, MAGUK p55 family member Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in programmed cell death IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gasdermin-E
    Names
    DFNA5, deafness associated tumor suppressor
    non-syndromic hearing impairment protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      90388273..90448377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001096213.4 → XP_001096213.2  gasdermin-E isoform X1

      UniProtKB/TrEMBL
      A0A8J8XNM1, F6W422, F7CCN3, G7MLN2, H9FQQ8
      Conserved Domains (1) summary
      pfam04598
      Location:1 → 468
      Gasdermin; Gasdermin family

    2. XM_001096330.3 → XP_001096330.2  gasdermin-E isoform X1

      UniProtKB/TrEMBL
      A0A8J8XNM1, F6W422, F7CCN3, G7MLN2, H9FQQ8
      Related
      ENSMMUP00000022272.4, ENSMMUT00000023795.4
      Conserved Domains (1) summary
      pfam04598
      Location:1 → 468
      Gasdermin; Gasdermin family

    3. XM_028845953.1 → XP_028701786.1  gasdermin-E isoform X1

      UniProtKB/TrEMBL
      A0A8J8XNM1, F6W422, F7CCN3, G7MLN2, H9FQQ8
      Related
      ENSMMUP00000035161.3, ENSMMUT00000042162.3
      Conserved Domains (1) summary
      pfam04598
      Location:1 → 468
      Gasdermin; Gasdermin family

    4. XM_028845954.1 → XP_028701787.1  gasdermin-E isoform X2

      UniProtKB/TrEMBL
      A0A8J8XNM1, G7MLN2, H9FQQ8
      Conserved Domains (1) summary
      pfam04598
      Location:34 → 433
      Gasdermin; Gasdermin family
    Nucleotide Protein
    Heading Accession and Version

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