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    LOC711432 calponin-2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711432, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC711432
    Gene description
    calponin-2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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    Genomic context

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    See LOC711432 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (102051283..102053411)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (102494376..102496518)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD77 Neighboring gene ATP-dependent RNA helicase DDX3X pseudogene Neighboring gene tachykinin receptor 3 Neighboring gene uncharacterized LOC106998435 Neighboring gene uncharacterized LOC114678170

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actomyosin structure organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calponin-2; LOW QUALITY PROTEIN: calponin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      102051283..102053411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001110773.4 → XP_001110773.3  LOW QUALITY PROTEIN: calponin-2

      UniProtKB/TrEMBL
      F6Q743
      Conserved Domains (2) summary
      COG5199
      Location:19 → 190
      SCP1; Calponin [Cytoskeleton]
      pfam00402
      Location:206 → 229
      Calponin; Calponin family repeat
    Nucleotide Protein
    Heading Accession and Version

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