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    ATXN2L ataxin 2 like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708359, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATXN2Lprovided by VGNC
    Official Full Name
    ataxin 2 likeprovided by VGNC
    Primary source
    VGNC:VGNC:70159
    See related
    Ensembl:ENSMMUG00000003298
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN2L in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (26899187..26913992, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (27362674..27377428, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene SH2B adaptor protein 1 Neighboring gene Tu translation elongation factor, mitochondrial Neighboring gene eukaryotic translation initiation factor 3 subunit C Neighboring gene CLN3 lysosomal/endosomal transmembrane protein, battenin Neighboring gene apolipoprotein B receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in stress granule assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-2-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      26899187..26913992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125883.2 → XP_014981369.1  ataxin-2-like protein isoform X10

      UniProtKB/TrEMBL
      H9Z4W4
      Conserved Domains (4) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain
      cl25764
      Location:760 → 999
      PAT1; Topoisomerase II-associated protein PAT1
      cl26464
      Location:338 → 950
      Atrophin-1; Atrophin-1 family

    2. XM_015125889.2 → XP_014981375.1  ataxin-2-like protein isoform X13

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    3. XM_015125887.2 → XP_014981373.1  ataxin-2-like protein isoform X13

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    4. XM_028841346.1 → XP_028697179.1  ataxin-2-like protein isoform X13

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    5. XM_028841341.1 → XP_028697174.1  ataxin-2-like protein isoform X3

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1036
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    6. XM_015125875.2 → XP_014981361.1  ataxin-2-like protein isoform X5

      UniProtKB/TrEMBL
      H9Z4W4
      Conserved Domains (4) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain
      cl25764
      Location:760 → 999
      PAT1; Topoisomerase II-associated protein PAT1
      cl26464
      Location:338 → 950
      Atrophin-1; Atrophin-1 family

    7. XM_015125881.2 → XP_014981367.1  ataxin-2-like protein isoform X8

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    8. XM_015125879.2 → XP_014981365.1  ataxin-2-like protein isoform X8

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    9. XM_028841344.1 → XP_028697177.1  ataxin-2-like protein isoform X8

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    10. XM_015125868.2 → XP_014981354.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    11. XM_015125866.2 → XP_014981352.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    12. XM_028841340.1 → XP_028697173.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    13. XM_015125886.2 → XP_014981372.1  ataxin-2-like protein isoform X12

      UniProtKB/TrEMBL
      F7FFJ8, H9Z4W4, I2CYG4
      Related
      ENSMMUP00000004395.4, ENSMMUT00000004661.4
      Conserved Domains (4) summary
      COG5180
      Location:211 → 746
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam03153
      Location:759 → 943
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    14. XM_015125885.2 → XP_014981371.1  ataxin-2-like protein isoform X11

      UniProtKB/TrEMBL
      H9FPF7, I2CUK3
      Related
      ENSMMUP00000004396.4, ENSMMUT00000004662.4
      Conserved Domains (2) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    15. XM_015125878.2 → XP_014981364.1  ataxin-2-like protein isoform X7

      UniProtKB/TrEMBL
      H9Z4W4
      Conserved Domains (4) summary
      COG5180
      Location:211 → 746
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam03153
      Location:759 → 943
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    16. XM_015125877.2 → XP_014981363.1  ataxin-2-like protein isoform X6

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (2) summary
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    17. XM_015125870.2 → XP_014981356.1  ataxin-2-like protein isoform X2

      UniProtKB/TrEMBL
      A0A5F8AD48, H9FPF6
      Related
      ENSMMUP00000075796.1, ENSMMUT00000095313.1
      Conserved Domains (3) summary
      COG5180
      Location:211 → 746
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    18. XM_015125874.2 → XP_014981360.1  ataxin-2-like protein isoform X4

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (3) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    19. XM_015125882.2 → XP_014981368.1  ataxin-2-like protein isoform X9

      UniProtKB/TrEMBL
      H9FPF7
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam03153
      Location:765 → 949
      TFIIA; Transcription factor IIA, alpha/beta subunit
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:124 → 193
      SM-ATX; Ataxin 2 SM domain

    20. XM_028841347.1 → XP_028697180.1  ataxin-2-like protein isoform X14

      UniProtKB/TrEMBL
      G7NQG8
      Conserved Domains (4) summary
      COG5180
      Location:150 → 691
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:737 → 975
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:205 → 273
      LsmAD; LsmAD domain
      pfam14438
      Location:61 → 137
      SM-ATX; Ataxin 2 SM domain

    21. XM_015125867.2 → XP_014981353.1  ataxin-2-like protein isoform X1

      UniProtKB/TrEMBL
      H9Z4W2
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK10263
      Location:669 → 949
      PRK10263; DNA translocase FtsK; Provisional
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    22. XM_015125888.2 → XP_014981374.1  ataxin-2-like protein isoform X13

      UniProtKB/TrEMBL
      H9FPF7
      Related
      ENSMMUP00000079735.1, ENSMMUT00000094170.1
      Conserved Domains (4) summary
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam09770
      Location:798 → 1039
      PAT1; Topoisomerase II-associated protein PAT1
      pfam06741
      Location:266 → 334
      LsmAD; LsmAD domain
      pfam14438
      Location:122 → 198
      SM-ATX; Ataxin 2 SM domain

    23. XM_015125880.2 → XP_014981366.1  ataxin-2-like protein isoform X8

      UniProtKB/TrEMBL
      H9Z4W2
      Related
      ENSMMUP00000075642.1, ENSMMUT00000088588.1
      Conserved Domains (4) summary
      PHA03247
      Location:676 → 1059
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:211 → 752
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:266 → 328
      LsmAD; LsmAD domain
      pfam14438
      Location:125 → 198
      SM-ATX; Ataxin 2 SM domain

    RNA

    1. XR_003725579.1 RNA Sequence

    2. XR_001441691.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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