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    ARNT2 aryl hydrocarbon receptor nuclear translocator 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712786, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARNT2provided by VGNC
    Official Full Name
    aryl hydrocarbon receptor nuclear translocator 2provided by VGNC
    Primary source
    VGNC:VGNC:84309
    See related
    Ensembl:ENSMMUG00000011566
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ARNT2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (57722339..57924921)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (58006291..58160406)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene fumarylacetoacetate hydrolase Neighboring gene cortexin domain containing 1 Neighboring gene histidine-rich glycoprotein-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of aryl hydrocarbon receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aryl hydrocarbon receptor nuclear translocator 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      57722339..57924921
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851227.1 → XP_028707060.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X4

      UniProtKB/TrEMBL
      G7MYM7
      Conserved Domains (3) summary
      cd18947
      Location:62 → 124
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
      pfam00989
      Location:137 → 243
      PAS; PAS fold
      pfam14598
      Location:336 → 436
      PAS_11; PAS domain

    2. XM_028851222.1 → XP_028707055.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X1

      UniProtKB/TrEMBL
      G7MYM7, H9EP17
      Related
      ENSMMUP00000043561.2, ENSMMUT00000061888.2
      Conserved Domains (3) summary
      cd18947
      Location:62 → 124
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
      pfam00989
      Location:137 → 243
      PAS; PAS fold
      pfam14598
      Location:336 → 436
      PAS_11; PAS domain

    3. XM_028851228.1 → XP_028707061.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X5

      UniProtKB/TrEMBL
      G7MYM7
      Conserved Domains (3) summary
      pfam14598
      Location:336 → 436
      PAS_11; PAS domain
      pfam00010
      Location:65 → 117
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:137 → 243
      PAS; PAS fold

    4. XM_028851226.1 → XP_028707059.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

      UniProtKB/TrEMBL
      F7BLZ3, F7BM12, G7MYM7
      Related
      ENSMMUP00000015183.4, ENSMMUT00000016201.4
      Conserved Domains (3) summary
      cd18947
      Location:51 → 113
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
      pfam00989
      Location:126 → 232
      PAS; PAS fold
      pfam14598
      Location:325 → 425
      PAS_11; PAS domain

    5. XM_028851224.1 → XP_028707057.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

      UniProtKB/TrEMBL
      F7BLZ3, F7BM12, G7MYM7
      Conserved Domains (3) summary
      cd18947
      Location:51 → 113
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
      pfam00989
      Location:126 → 232
      PAS; PAS fold
      pfam14598
      Location:325 → 425
      PAS_11; PAS domain

    6. XM_028851223.1 → XP_028707056.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X2

      UniProtKB/TrEMBL
      G7MYM7
      Conserved Domains (3) summary
      pfam14598
      Location:328 → 428
      PAS_11; PAS domain
      pfam00010
      Location:57 → 109
      HLH; Helix-loop-helix DNA-binding domain
      pfam00989
      Location:129 → 235
      PAS; PAS fold

    7. XM_028851225.1 → XP_028707058.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

      UniProtKB/TrEMBL
      F7BLZ3, F7BM12, G7MYM7
      Related
      ENSMMUP00000015186.4, ENSMMUT00000016204.4
      Conserved Domains (3) summary
      cd18947
      Location:51 → 113
      bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
      pfam00989
      Location:126 → 232
      PAS; PAS fold
      pfam14598
      Location:325 → 425
      PAS_11; PAS domain
    Nucleotide Protein
    Heading Accession and Version

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