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    DSP desmoplakin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694860, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DSPprovided by VGNC
    Official Full Name
    desmoplakinprovided by VGNC
    Primary source
    VGNC:VGNC:72004
    See related
    Ensembl:ENSMMUG00000014784
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DSP in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (162499026..162544672, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (7611151..7656761)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 48 Neighboring gene uncharacterized LOC114677713 Neighboring gene 40S ribosomal protein S26-like Neighboring gene heterogeneous nuclear ribonucleoprotein L pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intermediate filament cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skin development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in wound healing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intercalated disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    desmoplakin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      162499026..162544672 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001085012.3 → XP_001085012.2  desmoplakin isoform X1

      UniProtKB/TrEMBL
      F6WDG6, I2CWK6
      Related
      ENSMMUP00000019406.4, ENSMMUT00000020738.4
      Conserved Domains (6) summary
      pfam05483
      Location:671 → 1389
      SCP-1; Synaptonemal complex protein 1 (SCP-1)
      smart00250
      Location:2084 → 2121
      PLEC; Plectin repeat
      COG1196
      Location:1077 → 1907
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00176
      Location:285 → 450
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00681
      Location:2649 → 2688
      Plectin; Plectin repeat
      cl02488
      Location:190 → 366
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_001084900.3 → XP_001084900.2  desmoplakin isoform X2

      Conserved Domains (5) summary
      smart00250
      Location:1485 → 1522
      PLEC; Plectin repeat
      COG1196
      Location:1017 → 1346
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd00176
      Location:285 → 450
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      pfam00681
      Location:2050 → 2089
      Plectin; Plectin repeat
      pfam15921
      Location:715 → 1457
      CCDC158; Coiled-coil domain-containing protein 158
    Nucleotide Protein
    Heading Accession and Version

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