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    TMLHE trimethyllysine hydroxylase, epsilon [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703711, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TMLHEprovided by VGNC
    Official Full Name
    trimethyllysine hydroxylase, epsilonprovided by VGNC
    Primary source
    VGNC:VGNC:79123
    Locus tag
    EGK_21127
    See related
    Ensembl:ENSMMUG00000009481
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TMLHE in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (151456811..151560575, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (148678581..148782378, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene coagulation factor VIII associated 1 Neighboring gene H2A.B variant histone 3 Neighboring gene sprouty RTK signaling antagonist 3 Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog Neighboring gene S-adenosylmethionine decarboxylase proenzyme pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables trimethyllysine dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carnitine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trimethyllysine dioxygenase, mitochondrial
    XP_001099674.2
    XP_014984067.1
    XP_014984068.1
    XP_014984069.1
    XP_028698034.1
    XP_028698035.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      151456811..151560575 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015128582.2 → XP_014984068.1  trimethyllysine dioxygenase, mitochondrial isoform X3

      Conserved Domains (3) summary
      cd00250
      Location:74 → 340
      CAS_like; Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases ...
      TIGR02410
      Location:2 → 351
      carnitine_TMLD; trimethyllysine dioxygenase
      cl01414
      Location:1 → 65
      DUF971; Protein of unknown function (DUF971)

    2. XM_001099674.3 → XP_001099674.2  trimethyllysine dioxygenase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A663DI60, A0A8J8YF36, F6YUT6, F6YUU2, G7NSZ0
      Related
      ENSMMUP00000012404.4, ENSMMUT00000013234.4
      Conserved Domains (1) summary
      TIGR02410
      Location:70 → 419
      carnitine_TMLD; trimethyllysine dioxygenase

    3. XM_028842201.1 → XP_028698034.1  trimethyllysine dioxygenase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A663DI60, A0A8J8YF36, F6YUT6, F6YUU2, G7NSZ0
      Related
      ENSMMUP00000012402.3, ENSMMUT00000013232.4
      Conserved Domains (1) summary
      TIGR02410
      Location:70 → 419
      carnitine_TMLD; trimethyllysine dioxygenase

    4. XM_015128581.2 → XP_014984067.1  trimethyllysine dioxygenase, mitochondrial isoform X3

      Conserved Domains (3) summary
      cd00250
      Location:74 → 340
      CAS_like; Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases ...
      TIGR02410
      Location:2 → 351
      carnitine_TMLD; trimethyllysine dioxygenase
      cl01414
      Location:1 → 65
      DUF971; Protein of unknown function (DUF971)

    5. XM_028842202.1 → XP_028698035.1  trimethyllysine dioxygenase, mitochondrial isoform X2

      Conserved Domains (1) summary
      TIGR02410
      Location:70 → 379
      carnitine_TMLD; trimethyllysine dioxygenase

    6. XM_015128583.2 → XP_014984069.1  trimethyllysine dioxygenase, mitochondrial isoform X4

      Conserved Domains (1) summary
      cl00184
      Location:70 → 333
      CAS_like; Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases ...

    RNA

    1. XR_001442152.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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