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    TARBP2 TARBP2 subunit of RISC loading complex [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703294, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TARBP2provided by VGNC
    Official Full Name
    TARBP2 subunit of RISC loading complexprovided by VGNC
    Primary source
    VGNC:VGNC:78099
    See related
    Ensembl:ENSMMUG00000018492
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TARBP2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (53079332..53084801)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (52148599..52154075)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 2 Neighboring gene mitogen-activated protein kinase kinase kinase 12 Neighboring gene neuropeptide FF-amide peptide precursor Neighboring gene activating transcription factor 7 Neighboring gene uncharacterized LOC114670857

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pre-miRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables siRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of miRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of siRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of viral transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RISC-loading complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RISC-loading complex subunit TARBP2
    Names
    TARBP2, RISC loading complex RNA binding subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      53079332..53084801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151872.2 → XP_015007358.2  RISC-loading complex subunit TARBP2 isoform X1

      UniProtKB/TrEMBL
      A0A5F8ACB8, A0A8J8XUW4, F6X0G8, G7N752
      Related
      ENSMMUP00000074616.1, ENSMMUT00000089670.1
      Conserved Domains (2) summary
      smart00358
      Location:31 → 79
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:159 → 222
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...

    2. XM_015151875.2 → XP_015007361.2  RISC-loading complex subunit TARBP2 isoform X2

      UniProtKB/TrEMBL
      F6X0G8, F6X0I0
      Conserved Domains (2) summary
      smart00358
      Location:10 → 58
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:138 → 201
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...

    3. XM_015151873.2 → XP_015007359.2  RISC-loading complex subunit TARBP2 isoform X2

      UniProtKB/TrEMBL
      F6X0G8, F6X0I0
      Related
      ENSMMUP00000024336.4, ENSMMUT00000026007.4
      Conserved Domains (2) summary
      smart00358
      Location:10 → 58
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:138 → 201
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...

    4. XM_028829570.1 → XP_028685403.1  RISC-loading complex subunit TARBP2 isoform X2

      UniProtKB/TrEMBL
      F6X0G8, F6X0I0
      Conserved Domains (2) summary
      smart00358
      Location:10 → 58
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:138 → 201
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
    Nucleotide Protein
    Heading Accession and Version

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