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    TPRX1 tetrapeptide repeat homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718383, updated on 5-Mar-2024

    Summary

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    Gene symbol
    TPRX1
    Gene description
    tetrapeptide repeat homeobox 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See TPRX1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (47817140..47819700, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (43191086..43193368, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene NOP53 ribosome biogenesis factor Neighboring gene small nucleolar RNA SNORD23 Neighboring gene selenoprotein W Neighboring gene uncharacterized LOC106994809 Neighboring gene cone-rod homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetra-peptide repeat homeobox protein 1
    Names
    tetra-peptide repeat homeobox 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      47817140..47819700 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839094.1 → XP_028694927.1  tetra-peptide repeat homeobox protein 1

      Conserved Domains (2) summary
      PHA03247
      Location:116 → 417
      PHA03247; large tegument protein UL36; Provisional
      pfam00046
      Location:33 → 74
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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