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    MYCL MYCL proto-oncogene, bHLH transcription factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716497, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MYCLprovided by VGNC
    Official Full Name
    MYCL proto-oncogene, bHLH transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:100016
    See related
    Ensembl:ENSMMUG00000016223
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    MYCL1
    Orthologs
    human mouse all
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    Genomic context

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    See MYCL in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (184679046..184686473)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (39173139..39180227, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997909 Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid Neighboring gene thioredoxin-like Neighboring gene tRNA isopentenyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein L-Myc
    Names
    v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
    v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      184679046..184686473
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835497.1 → XP_028691330.1  protein L-Myc isoform X2

      UniProtKB/TrEMBL
      A0A1D5RHG5, A0A5F7ZLF1
      Related
      ENSMMUP00000059759.2, ENSMMUT00000062704.2
      Conserved Domains (2) summary
      cd00083
      Location:295 → 349
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
      pfam01056
      Location:11 → 256
      Myc_N; Myc amino-terminal region

    2. XM_015136019.2 → XP_014991505.2  protein L-Myc isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZA90, A0A5F7ZLF1
      Related
      ENSMMUP00000062098.1, ENSMMUT00000085660.1
      Conserved Domains (2) summary
      cd00083
      Location:309 → 363
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
      pfam01056
      Location:26 → 270
      Myc_N; Myc amino-terminal region
    Nucleotide Protein
    Heading Accession and Version

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