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    POLR1A RNA polymerase I subunit A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696963, updated on 17-Aug-2024

    Summary

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    Official Symbol
    POLR1Aprovided by VGNC
    Official Full Name
    RNA polymerase I subunit Aprovided by VGNC
    Primary source
    VGNC:VGNC:76044
    See related
    Ensembl:ENSMMUG00000015815
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See POLR1A in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (22362009..22445061)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (87788968..87868033, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene inner membrane mitochondrial protein Neighboring gene small nucleolar RNA SNORD94 Neighboring gene pentatricopeptide repeat domain 3 Neighboring gene uncharacterized LOC114671915 Neighboring gene uncharacterized LOC106993038

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase I subunit RPA1
    Names
    polymerase (RNA) I polypeptide A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      22362009..22445061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112779.2 → XP_014968265.2  DNA-directed RNA polymerase I subunit RPA1 isoform X1

      UniProtKB/TrEMBL
      F7AG21
      Related
      ENSMMUP00000020791.4, ENSMMUT00000022222.4
      Conserved Domains (2) summary
      cd01435
      Location:16 → 1004
      RNAP_I_RPA1_N; Largest subunit (RPA1) of eukaryotic RNA polymerase I (RNAP I), N-terminal domain
      pfam04998
      Location:958 → 1670
      RNA_pol_Rpb1_5; RNA polymerase Rpb1, domain 5

    2. XM_015112780.2 → XP_014968266.2  DNA-directed RNA polymerase I subunit RPA1 isoform X2

      UniProtKB/TrEMBL
      F7AG21
      Conserved Domains (2) summary
      cd01435
      Location:156 → 896
      RNAP_I_RPA1_N; Largest subunit (RPA1) of eukaryotic RNA polymerase I (RNAP I), N-terminal domain
      pfam04998
      Location:850 → 1562
      RNA_pol_Rpb1_5; RNA polymerase Rpb1, domain 5
    Nucleotide Protein
    Heading Accession and Version

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