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    WDPCP WD repeat containing planar cell polarity effector [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694431, updated on 17-Aug-2024

    Summary

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    Official Symbol
    WDPCPprovided by VGNC
    Official Full Name
    WD repeat containing planar cell polarity effectorprovided by VGNC
    Primary source
    VGNC:VGNC:79677
    See related
    Ensembl:ENSMMUG00000003979
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See WDPCP in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (45192719..45676745)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (63974725..64458936, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S4 pseudogene Neighboring gene malate dehydrogenase 1 Neighboring gene uncharacterized LOC114671955 Neighboring gene ornithine decarboxylase 1-like Neighboring gene WAS/WASL-interacting protein family member 3-like Neighboring gene uncharacterized LOC114671803 Neighboring gene orthodenticle homeobox 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of protein localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axonemal basal plate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing and planar cell polarity effector protein fritz homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      45192719..45676745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112569.2 → XP_014968055.1  WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q8Z3, G7NA61
      Related
      ENSMMUP00000044511.2, ENSMMUT00000059556.2
      Conserved Domains (2) summary
      pfam11768
      Location:46 → 589
      DUF3312; Protein of unknown function (DUF3312)
      sd00039
      Location:308 → 343
      7WD40; WD40 repeat [structural motif]

    2. XM_015112570.2 → XP_014968056.1  WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X2

      UniProtKB/TrEMBL
      G7NA61
      Conserved Domains (2) summary
      pfam11768
      Location:46 → 589
      DUF3312; Protein of unknown function (DUF3312)
      sd00039
      Location:308 → 343
      7WD40; WD40 repeat [structural motif]

    3. XM_015112571.2 → XP_014968057.1  WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X3

      UniProtKB/TrEMBL
      G7NA61
      Conserved Domains (2) summary
      pfam11768
      Location:46 → 589
      DUF3312; Protein of unknown function (DUF3312)
      sd00039
      Location:308 → 343
      7WD40; WD40 repeat [structural motif]

    4. XM_015112574.2 → XP_014968060.1  WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X6

      UniProtKB/TrEMBL
      F6XYF5
      Conserved Domains (2) summary
      pfam11768
      Location:46 → 589
      DUF3312; Protein of unknown function (DUF3312)
      sd00039
      Location:308 → 343
      7WD40; WD40 repeat [structural motif]

    5. XM_015112573.2 → XP_014968059.1  WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X5

      UniProtKB/TrEMBL
      F6XYF5
      Related
      ENSMMUP00000005308.4, ENSMMUT00000005639.4
      Conserved Domains (2) summary
      pfam11768
      Location:46 → 589
      DUF3312; Protein of unknown function (DUF3312)
      sd00039
      Location:308 → 343
      7WD40; WD40 repeat [structural motif]

    6. XM_028832445.1 → XP_028688278.1  WD repeat-containing and planar cell polarity effector protein fritz homolog isoform X4

      UniProtKB/TrEMBL
      G7NA61
      Conserved Domains (1) summary
      pfam11768
      Location:1 → 512
      Frtz; WD repeat-containing and planar cell polarity effector protein Fritz

    RNA

    1. XR_003722150.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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