U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HYCC1 hyccin PI4KA lipid kinase complex subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705467, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    HYCC1provided by VGNC
    Official Full Name
    hyccin PI4KA lipid kinase complex subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:72327
    See related
    Ensembl:ENSMMUG00000000517
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    hyccin; FAM126A
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HYCC1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (92102611..92173902)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (85275273..85345489)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 42 Neighboring gene kelch like family member 7 Neighboring gene GTP:AMP phosphotransferase AK3, mitochondrial pseudogene Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene uncharacterized LOC114676965 Neighboring gene uncharacterized LOC106997495

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    hyccin
    Names
    family with sequence similarity 126 member A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266156.1 → NP_001253085.1  hyccin

      See identical proteins and their annotated locations for NP_001253085.1

      Status: PROVISIONAL

      Source sequence(s)
      JU477525
      UniProtKB/TrEMBL
      A0A1D5QFT7, H9ZEG3
      Related
      ENSMMUP00000072543.1, ENSMMUT00000090519.1
      Conserved Domains (1) summary
      pfam09790
      Location:22 → 330
      Hyccin; Hyccin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      92102611..92173902
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844934.1 → XP_028700767.1  hyccin isoform X4

      UniProtKB/TrEMBL
      F7A477
      Related
      ENSMMUP00000000702.3, ENSMMUT00000000759.4
      Conserved Domains (1) summary
      pfam09790
      Location:22 → 330
      Hyccin

    2. XM_028844935.1 → XP_028700768.1  hyccin isoform X5

      Conserved Domains (1) summary
      pfam09790
      Location:22 → 330
      Hyccin

    3. XM_028844933.1 → XP_028700766.1  hyccin isoform X3

      Conserved Domains (1) summary
      pfam09790
      Location:42 → 350
      Hyccin

    4. XM_028844932.1 → XP_028700765.1  hyccin isoform X2

      Conserved Domains (1) summary
      pfam09790
      Location:42 → 350
      Hyccin

    5. XM_028844931.1 → XP_028700764.1  hyccin isoform X1

      UniProtKB/TrEMBL
      A0A1D5QFT7
      Conserved Domains (1) summary
      pfam09790
      Location:42 → 350
      Hyccin
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.