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    CNTN5 contactin 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700826, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNTN5provided by VGNC
    Official Full Name
    contactin 5provided by VGNC
    Primary source
    VGNC:VGNC:71287
    See related
    Ensembl:ENSMMUG00000016737
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CNTN5 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (92334039..93681438)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (92218417..93302548)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672173 Neighboring gene zinc finger protein 614 pseudogene Neighboring gene uncharacterized LOC114672383 Neighboring gene replication protein A 32 kDa subunit pseudogene Neighboring gene Rho GTPase activating protein 42 Neighboring gene small nucleolar RNA U13 Neighboring gene progesterone receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    contactin-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      92334039..93681438
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833920.1 → XP_028689753.1  contactin-5

      UniProtKB/TrEMBL
      F6V5U5, G7NBQ2
      Conserved Domains (3) summary
      cd05848
      Location:98 → 191
      Ig1_Contactin-5; First immunoglobulin (Ig) domain of contactin-5
      cd00063
      Location:671 → 768
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl11960
      Location:300 → 387
      Ig; Immunoglobulin domain

    2. XM_028833922.1 → XP_028689755.1  contactin-5

      UniProtKB/TrEMBL
      F6V5U5, G7NBQ2
      Conserved Domains (3) summary
      cd05848
      Location:98 → 191
      Ig1_Contactin-5; First immunoglobulin (Ig) domain of contactin-5
      cd00063
      Location:671 → 768
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl11960
      Location:300 → 387
      Ig; Immunoglobulin domain

    3. XM_028833921.1 → XP_028689754.1  contactin-5

      UniProtKB/TrEMBL
      F6V5U5, G7NBQ2
      Related
      ENSMMUP00000021999.3, ENSMMUT00000023514.4
      Conserved Domains (3) summary
      cd05848
      Location:98 → 191
      Ig1_Contactin-5; First immunoglobulin (Ig) domain of contactin-5
      cd00063
      Location:671 → 768
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl11960
      Location:300 → 387
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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