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    TRMT6 tRNA methyltransferase 6 non-catalytic subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718229, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRMT6provided by VGNC
    Official Full Name
    tRNA methyltransferase 6 non-catalytic subunitprovided by VGNC
    Primary source
    VGNC:VGNC:79294
    Locus tag
    EGK_02651
    See related
    Ensembl:ENSMMUG00000013728
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRMT6 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (60561816..60575050)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (38797623..38810815, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene cardiolipin synthase 1 Neighboring gene minichromosome maintenance 8 homologous recombination repair factor Neighboring gene exosome complex component RRP4 pseudogene Neighboring gene KN motif and ankyrin repeat domain-containing protein 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of tRNA (m1A) methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6
    Names
    tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6
    tRNA methyltransferase 6 homolog
    tRNA(m1A58)-methyltransferase subunit TRM6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261660.1 → NP_001248589.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6

      See identical proteins and their annotated locations for NP_001248589.1

      Status: PROVISIONAL

      Source sequence(s)
      JU475941
      UniProtKB/TrEMBL
      A0A8J8YC52, F6RWA5, G7N2X5
      Related
      ENSMMUP00000018054.2, ENSMMUT00000019280.4
      Conserved Domains (1) summary
      pfam04189
      Location:19 → 265
      Gcd10p; Gcd10p family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      60561816..60575050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149369.2 → XP_015004855.1  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1

      Conserved Domains (1) summary
      pfam04189
      Location:1 → 82
      Gcd10p; Gcd10p family
    Nucleotide Protein
    Heading Accession and Version

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