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    SAPCD1 suppressor APC domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716394, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SAPCD1provided by VGNC
    Official Full Name
    suppressor APC domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:83461
    Locus tag
    EGK_14725
    See related
    Ensembl:ENSMMUG00000045974
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C6orf26
    Orthologs
    human mouse all
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    Genomic context

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    See SAPCD1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (137739419..137741491, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (32630687..32632768)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997897 Neighboring gene LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene valyl-tRNA synthetase 1 Neighboring gene von Willebrand factor A domain containing 7 Neighboring gene mutS homolog 5 Neighboring gene DDAH family member 2, ADMA-independent

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    suppressor APC domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194586.1 → NP_001181515.1  suppressor APC domain-containing protein 1

      See identical proteins and their annotated locations for NP_001181515.1

      Status: VALIDATED

      Source sequence(s)
      QNVO02000341
      UniProtKB/TrEMBL
      A0A1D5Q940, A0A8J8YCH1, G7MRK2
      Related
      ENSMMUP00000044558.1, ENSMMUT00000070394.2
      Conserved Domains (1) summary
      pfam11414
      Location:35 → 114
      Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      137739419..137741491 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135943.2 → XP_014991429.1  suppressor APC domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      pfam11414
      Location:35 → 114
      Suppressor_APC; Adenomatous polyposis coli tumour suppressor protein

    2. XM_028846838.1 → XP_028702671.1  suppressor APC domain-containing protein 1 isoform X3

      Conserved Domains (1) summary
      pfam11414
      Location:35 → 114
      Suppressor_APC; Adenomatous polyposis coli tumor suppressor protein

    3. XM_015135941.2 → XP_014991427.1  suppressor APC domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      pfam11414
      Location:35 → 114
      Suppressor_APC; Adenomatous polyposis coli tumour suppressor protein
    Nucleotide Protein
    Heading Accession and Version

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