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    PSD2 pleckstrin and Sec7 domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694873, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PSD2provided by VGNC
    Official Full Name
    pleckstrin and Sec7 domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:76286
    Locus tag
    EGK_16909
    See related
    Ensembl:ENSMMUG00000014636
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PSD2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (137189289..137237847)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (137562687..137619349)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene CXXC finger protein 5 Neighboring gene uncharacterized LOC106998963 Neighboring gene neuregulin 2 Neighboring gene prostaglandin reductase 1 pseudogene Neighboring gene uncharacterized LOC106998965

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PH and SEC7 domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265716.1 → NP_001252645.1  PH and SEC7 domain-containing protein 2

      See identical proteins and their annotated locations for NP_001252645.1

      Status: PROVISIONAL

      Source sequence(s)
      JV667232
      UniProtKB/TrEMBL
      A0A5F7ZNF0, A0A5F8ARC5, A0A8J8YQL2, F7G2D8, G7MUX4
      Related
      ENSMMUP00000019212.4, ENSMMUT00000020528.4
      Conserved Domains (3) summary
      cd00171
      Location:297 → 464
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:510 → 633
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
      pfam00169
      Location:530 → 625
      PH; PH domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      137189289..137237847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849043.1 → XP_028704876.1  PH and SEC7 domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZNF0, A0A5F8ACQ7
      Related
      ENSMMUP00000074714.1, ENSMMUT00000090894.1
      Conserved Domains (2) summary
      cd00171
      Location:297 → 464
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:510 → 633
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

    2. XM_015140822.2 → XP_014996308.1  PH and SEC7 domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZNF0, A0A5F8ARC5, A0A8J8YQL2, F7G2D8, G7MUX4
      Related
      ENSMMUP00000079622.1, ENSMMUT00000081542.1
      Conserved Domains (3) summary
      cd00171
      Location:297 → 464
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:510 → 633
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
      pfam00169
      Location:530 → 625
      PH; PH domain
    Nucleotide Protein
    Heading Accession and Version

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