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    CLDND1 claudin domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698472, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLDND1provided by VGNC
    Official Full Name
    claudin domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:71169
    Locus tag
    EGK_11224
    See related
    Ensembl:ENSMMUG00000009549
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CLDND1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (177584360..177591911)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (19321775..19329336, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L38 pseudogene Neighboring gene G protein-coupled receptor 15 Neighboring gene olfactory receptor 5K2 Neighboring gene olfactory receptor, family 5, subfamily K, member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    claudin domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265740.1 → NP_001252669.1  claudin domain-containing protein 1

      See identical proteins and their annotated locations for NP_001252669.1

      Status: PROVISIONAL

      Source sequence(s)
      JV600233
      UniProtKB/TrEMBL
      A0A1D5QC73, I2CUI6
      Related
      ENSMMUP00000045642.2, ENSMMUT00000073813.2
      Conserved Domains (1) summary
      cl21598
      Location:40 → 257
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      177584360..177591911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015128652.2 → XP_014984138.1  claudin domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R551, A0A5S6R831, A0A8J8Y4V3, G7MK05
      Conserved Domains (1) summary
      cl21598
      Location:17 → 234
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    2. XM_015128655.2 → XP_014984141.1  claudin domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R551, A0A5S6R831, A0A8J8Y4V3, G7MK05
      Conserved Domains (1) summary
      cl21598
      Location:17 → 234
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    3. XM_015128658.2 → XP_014984144.1  claudin domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R551, A0A5S6R831, A0A8J8Y4V3, G7MK05
      Conserved Domains (1) summary
      cl21598
      Location:17 → 234
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

    4. XM_015128661.2 → XP_014984147.1  claudin domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5R551, A0A5S6R831, A0A8J8Y4V3, G7MK05
      Related
      ENSMMUP00000068722.1, ENSMMUT00000098708.1
      Conserved Domains (1) summary
      cl21598
      Location:17 → 234
      PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
    Nucleotide Protein
    Heading Accession and Version

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