U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ESYT1 extended synaptotagmin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711720, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ESYT1provided by VGNC
    Official Full Name
    extended synaptotagmin 1provided by VGNC
    Primary source
    VGNC:VGNC:72405
    See related
    Ensembl:ENSMMUG00000021979
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ESYT1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (55687825..55705777)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (54869342..54887539)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000892 Neighboring gene ribosomal protein L41 Neighboring gene zinc finger CCCH-type containing 10 Neighboring gene myosin light chain 6B Neighboring gene myosin light chain 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum-plasma membrane tethering IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    extended synaptotagmin-1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194625.2 → NP_001181554.1  extended synaptotagmin-1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000060
      UniProtKB/TrEMBL
      A0A1D5QPB7, A0A5F7ZMS1
      Related
      ENSMMUP00000049894.2, ENSMMUT00000078787.2
      Conserved Domains (4) summary
      cd04030
      Location:929 → 1054
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:437 → 541
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:605 → 724
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:115 → 271
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      55687825..55705777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828951.1 → XP_028684784.1  extended synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      F6RSH0
      Conserved Domains (4) summary
      cd04050
      Location:479 → 593
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:657 → 776
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:135 → 313
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain
      cl14603
      Location:981 → 1086
      C2; C2 domain

    2. XM_028828952.1 → XP_028684785.1  extended synaptotagmin-1 isoform X2

      UniProtKB/TrEMBL
      F6RSH0
      Related
      ENSMMUP00000028945.4, ENSMMUT00000030926.4
      Conserved Domains (4) summary
      cd04050
      Location:479 → 583
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:647 → 766
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:135 → 313
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain
      cl14603
      Location:971 → 1076
      C2; C2 domain

    3. XM_015151947.2 → XP_015007433.2  extended synaptotagmin-1 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZMS1, G7N7B4
      Conserved Domains (4) summary
      cd04030
      Location:981 → 1106
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:479 → 593
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:657 → 776
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:135 → 313
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    4. XM_001114269.4 → XP_001114269.1  extended synaptotagmin-1 isoform X4

      See identical proteins and their annotated locations for XP_001114269.1

      UniProtKB/TrEMBL
      A0A5F7ZMS1, H9EVG4
      Related
      ENSMMUP00000073631.1, ENSMMUT00000098204.1
      Conserved Domains (4) summary
      cd04030
      Location:971 → 1096
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:479 → 583
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:647 → 766
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:135 → 313
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.