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    CD5 CD5 molecule [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695249, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD5provided by VGNC
    Official Full Name
    CD5 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:70770
    See related
    Ensembl:ENSMMUG00000015018
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CD5 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (13107650..13136418, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (13156648..13166885, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672123 Neighboring gene VPS37C subunit of ESCRT-I Neighboring gene uncharacterized LOC100428235 Neighboring gene CD6 molecule Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 15 member 3 Neighboring gene transmembrane protein 132A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    T-cell surface glycoprotein CD5; LOW QUALITY PROTEIN: T-cell surface glycoprotein CD5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      13107650..13136418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001083880.4 → XP_001083880.3  LOW QUALITY PROTEIN: T-cell surface glycoprotein CD5

      UniProtKB/TrEMBL
      F6V5Q9
      Related
      ENSMMUP00000019685.4, ENSMMUT00000021055.4
      Conserved Domains (2) summary
      smart00202
      Location:36 → 133
      SR; Scavenger receptor Cys-rich
      pfam00530
      Location:285 → 371
      SRCR; Scavenger receptor cysteine-rich domain
    Nucleotide Protein
    Heading Accession and Version

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