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    PAX8 paired box 8 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701906, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PAX8provided by VGNC
    Official Full Name
    paired box 8provided by VGNC
    Primary source
    VGNC:VGNC:75767
    See related
    Ensembl:ENSMMUG00000011578
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PAX8 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (16398231..16459040, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (108214894..108277393, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene interleukin 1 receptor antagonist Neighboring gene pleckstrin and Sec7 domain containing 4 Neighboring gene uncharacterized LOC106993145 Neighboring gene ankyrin repeat domain 36C Neighboring gene uncharacterized LOC114671909

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    paired box protein Pax-8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      16398231..16459040 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113147.2 → XP_014968633.1  paired box protein Pax-8 isoform X5

      UniProtKB/TrEMBL
      G7NAZ0
      Conserved Domains (2) summary
      smart00351
      Location:9 → 134
      PAX; Paired Box domain
      pfam12403
      Location:282 → 386
      Pax2_C; Paired-box protein 2 C terminal

    2. XM_015113144.2 → XP_014968630.1  paired box protein Pax-8 isoform X3

      Conserved Domains (1) summary
      smart00351
      Location:9 → 134
      PAX; Paired Box domain

    3. XM_015113143.2 → XP_014968629.1  paired box protein Pax-8 isoform X1

      UniProtKB/TrEMBL
      G7NAZ0
      Conserved Domains (2) summary
      smart00351
      Location:9 → 134
      PAX; Paired Box domain
      pfam12403
      Location:344 → 455
      Pax2_C; Paired-box protein 2 C terminal

    4. XM_015113145.2 → XP_014968631.1  paired box protein Pax-8 isoform X4

      Conserved Domains (1) summary
      smart00351
      Location:9 → 133
      PAX; Paired Box domain

    5. XM_001093332.3 → XP_001093332.1  paired box protein Pax-8 isoform X6

      See identical proteins and their annotated locations for XP_001093332.1

      UniProtKB/TrEMBL
      G7NAZ0
      Conserved Domains (2) summary
      smart00351
      Location:9 → 133
      PAX; Paired Box domain
      pfam12403
      Location:281 → 385
      Pax2_C; Paired-box protein 2 C terminal

    6. XM_001093559.4 → XP_001093559.1  paired box protein Pax-8 isoform X2

      See identical proteins and their annotated locations for XP_001093559.1

      UniProtKB/TrEMBL
      F6PPM6, G7NAZ0
      Related
      ENSMMUP00000015207.3, ENSMMUT00000016225.3
      Conserved Domains (2) summary
      smart00351
      Location:9 → 133
      PAX; Paired Box domain
      pfam12403
      Location:343 → 454
      Pax2_C; Paired-box protein 2 C terminal
    Nucleotide Protein
    Heading Accession and Version

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