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    RBM12 RNA binding motif protein 12 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574161, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RBM12
    Gene description
    RNA binding motif protein 12
    Locus tag
    EGK_02457
    See related
    Ensembl:ENSMMUG00000020960
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBM12 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (70877766..70891462, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (28447572..28461287)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 4 Neighboring gene copine 1 Neighboring gene U6 spliceosomal RNA Neighboring gene NFS1 cysteine desulfurase Neighboring gene reactive oxygen species modulator 1 Neighboring gene RNA binding motif protein 39 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 12
    Names
    SH3/WW domain anchor protein in the nucleus
    SWAN

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001032840.1 → NP_001028012.1  RNA-binding protein 12

      See identical proteins and their annotated locations for NP_001028012.1

      Status: PROVISIONAL

      Source sequence(s)
      AF345333
      UniProtKB/Swiss-Prot
      Q8SQ27
      UniProtKB/TrEMBL
      A0A8J8Y854, G7N4Y6, H9FNG9
      Related
      ENSMMUP00000053163.1, ENSMMUT00000078457.2
      Conserved Domains (6) summary
      PHA03378
      Location:631 → 699
      PHA03378; EBNA-3B; Provisional
      cd12745
      Location:1 → 92
      RRM1_RBM12; RNA recognition motif 1 (RRM1) found in RNA-binding protein 12 (RBM12) and similar proteins
      cd12512
      Location:421 → 521
      RRM3_RBM12; RNA recognition motif 3 (RRM3) found in RNA-binding protein 12 (RBM12) and similar proteins
      cd12747
      Location:303 → 377
      RRM2_RBM12; RNA recognition motif 2 (RRM2) found in RNA-binding protein 12 (RBM12) and similar proteins
      cd12749
      Location:545 → 632
      RRM4_RBM12; RNA recognition motif 4 (RRM4) found in RNA-binding protein 12 (RBM12) and similar proteins
      cd12751
      Location:855 → 930
      RRM5_RBM12; RNA recognition motif 5 (RRM5) found in RNA-binding protein 12 (RBM12) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      70877766..70891462 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SQ27.1 GenPept UniProtKB/Swiss-Prot:Q8SQ27

    Gene LinkOut

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