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    CALCOCO1 calcium binding and coiled-coil domain 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703855, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CALCOCO1provided by VGNC
    Official Full Name
    calcium binding and coiled-coil domain 1provided by VGNC
    Primary source
    VGNC:VGNC:70668
    See related
    Ensembl:ENSMMUG00000009457
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CALCOCO1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (53303548..53320949, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (52370260..52387509, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit c locus 2 Neighboring gene uncharacterized LOC114671056 Neighboring gene uncharacterized LOC114671057 Neighboring gene uncharacterized LOC114671058

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    calcium-binding and coiled-coil domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      53303548..53320949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028829574.1 → XP_028685407.1  calcium-binding and coiled-coil domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      F7AA33, F7H2N4, F7H2N8, I0FTR6, I2CU60
      Related
      ENSMMUP00000039516.3, ENSMMUT00000046479.3
      Conserved Domains (2) summary
      TIGR04211
      Location:249 → 351
      SH3_and_anchor; SH3 domain protein
      pfam07888
      Location:13 → 595
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like

    2. XM_028829577.1 → XP_028685410.1  calcium-binding and coiled-coil domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      F7AA22
      Conserved Domains (2) summary
      TIGR04211
      Location:249 → 351
      SH3_and_anchor; SH3 domain protein
      pfam07888
      Location:13 → 595
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like

    3. XM_028829575.1 → XP_028685408.1  calcium-binding and coiled-coil domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      F7AA33, F7H2N4, F7H2N8, I0FTR6, I2CU60
      Related
      ENSMMUP00000012366.4, ENSMMUT00000013195.4
      Conserved Domains (2) summary
      TIGR04211
      Location:249 → 351
      SH3_and_anchor; SH3 domain protein
      pfam07888
      Location:13 → 595
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like

    4. XM_015151879.2 → XP_015007365.2  calcium-binding and coiled-coil domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      F7AA33, F7H2N4, F7H2N8, I0FTR6, I2CU60
      Related
      ENSMMUP00000039515.3, ENSMMUT00000046478.3
      Conserved Domains (2) summary
      TIGR04211
      Location:249 → 351
      SH3_and_anchor; SH3 domain protein
      pfam07888
      Location:13 → 595
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like

    5. XM_028829576.1 → XP_028685409.1  calcium-binding and coiled-coil domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      F7AA33, F7H2N4, F7H2N8, I0FTR6, I2CU60
      Related
      ENSMMUP00000065890.1, ENSMMUT00000109801.1
      Conserved Domains (2) summary
      TIGR04211
      Location:249 → 351
      SH3_and_anchor; SH3 domain protein
      pfam07888
      Location:13 → 595
      CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
    Nucleotide Protein
    Heading Accession and Version

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