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    LMO7 LIM domain 7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697648, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LMO7provided by VGNC
    Official Full Name
    LIM domain 7provided by VGNC
    Primary source
    VGNC:VGNC:74433
    See related
    Ensembl:ENSMMUG00000001312
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LMO7 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (57420053..57638034)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (56880775..57101278)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 6 Neighboring gene ubiquitin C-terminal hydrolase L3 Neighboring gene protein-glutamate O-methyltransferase-like Neighboring gene LMO7 downstream neighbor Neighboring gene uncharacterized LOC106994312

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LIM domain only protein 7
    Names
    LIM domain only 7
    XP_014976688.2
    XP_014976694.2
    XP_014976697.2
    XP_014976698.2
    XP_014976699.2
    XP_014976700.2
    XP_014976701.2
    XP_014976702.2
    XP_014976703.2
    XP_014976705.2
    XP_014976706.2
    XP_014976707.2
    XP_014976708.2
    XP_028693421.1
    XP_028693422.1
    XP_028693423.1
    XP_028693424.1
    XP_028693425.1
    XP_028693426.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      57420053..57638034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121212.2 → XP_014976698.2  LIM domain only protein 7 isoform X4

      UniProtKB/TrEMBL
      G7NJF7
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:1003 → 1070
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1562 → 1620
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:588 → 735
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1178 → 1445
      DUF5401; Family of unknown function (DUF5401)

    2. XM_015121222.2 → XP_014976708.2  LIM domain only protein 7 isoform X16

      UniProtKB/TrEMBL
      F7BN49
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:669 → 736
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1228 → 1286
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:242 → 401
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:844 → 1097
      DUF5401; Family of unknown function (DUF5401)

    3. XM_015121202.2 → XP_014976688.2  LIM domain only protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A9E0, F7BN97
      Related
      ENSMMUP00000001749.4, ENSMMUT00000001854.4
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:1071 → 1138
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1671 → 1729
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:656 → 803
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1287 → 1554
      DUF5401; Family of unknown function (DUF5401)

    4. XM_015121211.2 → XP_014976697.2  LIM domain only protein 7 isoform X3

      UniProtKB/TrEMBL
      F7BN32
      Related
      ENSMMUP00000001752.4, ENSMMUT00000001857.4
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:1003 → 1070
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1603 → 1661
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:588 → 735
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1219 → 1486
      DUF5401; Family of unknown function (DUF5401)

    5. XM_015121213.2 → XP_014976699.2  LIM domain only protein 7 isoform X5

      UniProtKB/TrEMBL
      G7NJF7
      Conserved Domains (4) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:1003 → 1070
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      pfam15949
      Location:588 → 735
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1178 → 1445
      DUF5401; Family of unknown function (DUF5401)

    6. XM_015121214.2 → XP_014976700.2  LIM domain only protein 7 isoform X6

      UniProtKB/TrEMBL
      F7BN32
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:909 → 976
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1509 → 1567
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:494 → 641
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1125 → 1392
      DUF5401; Family of unknown function (DUF5401)

    7. XM_015121215.2 → XP_014976701.2  LIM domain only protein 7 isoform X8

      UniProtKB/TrEMBL
      G7NJF7
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:909 → 976
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1468 → 1526
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:494 → 641
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1084 → 1351
      DUF5401; Family of unknown function (DUF5401)

    8. XM_015121219.2 → XP_014976705.2  LIM domain only protein 7 isoform X12

      UniProtKB/TrEMBL
      F7BN49
      Related
      ENSMMUP00000001750.4, ENSMMUT00000001855.4
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:669 → 736
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1269 → 1327
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:242 → 401
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:885 → 1152
      DUF5401; Family of unknown function (DUF5401)

    9. XM_015121220.2 → XP_014976706.2  LIM domain only protein 7 isoform X13

      UniProtKB/TrEMBL
      F7GXG9
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:659 → 726
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1259 → 1317
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:242 → 391
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:875 → 1142
      DUF5401; Family of unknown function (DUF5401)

    10. XM_015121221.2 → XP_014976707.2  LIM domain only protein 7 isoform X14

      UniProtKB/TrEMBL
      F7GXG9
      Related
      ENSMMUP00000036198.3, ENSMMUT00000043189.3
      Conserved Domains (5) summary
      cd00014
      Location:17 → 129
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
      cd00136
      Location:659 → 726
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1245 → 1303
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:242 → 391
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:861 → 1128
      DUF5401; Family of unknown function (DUF5401)

    11. XM_028837588.1 → XP_028693421.1  LIM domain only protein 7 isoform X7

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (3) summary
      cd00136
      Location:961 → 1028
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      pfam15949
      Location:546 → 693
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1136 → 1389
      DUF5401; Family of unknown function (DUF5401)

    12. XM_015121208.2 → XP_014976694.2  LIM domain only protein 7 isoform X2

      UniProtKB/TrEMBL
      A0A5F8A9E0
      Conserved Domains (4) summary
      cd00136
      Location:1029 → 1096
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1629 → 1687
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:614 → 761
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1245 → 1512
      DUF5401; Family of unknown function (DUF5401)

    13. XM_028837590.1 → XP_028693423.1  LIM domain only protein 7 isoform X10

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (4) summary
      cd00136
      Location:770 → 837
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1329 → 1387
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:355 → 502
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:945 → 1198
      DUF5401; Family of unknown function (DUF5401)

    14. XM_015121216.2 → XP_014976702.2  LIM domain only protein 7 isoform X9

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (4) summary
      cd00136
      Location:838 → 905
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1438 → 1496
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:423 → 570
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1054 → 1307
      DUF5401; Family of unknown function (DUF5401)

    15. XM_028837591.1 → XP_028693424.1  LIM domain only protein 7 isoform X11

      UniProtKB/TrEMBL
      H9FUD1
      Related
      ENSMMUP00000066159.1, ENSMMUT00000084483.1
      Conserved Domains (3) summary
      cd00136
      Location:770 → 837
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      pfam15949
      Location:355 → 502
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:945 → 1198
      DUF5401; Family of unknown function (DUF5401)

    16. XM_028837592.1 → XP_028693425.1  LIM domain only protein 7 isoform X15

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (4) summary
      cd00136
      Location:676 → 743
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1235 → 1293
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:261 → 408
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:851 → 1104
      DUF5401; Family of unknown function (DUF5401)

    17. XM_028837593.1 → XP_028693426.1  LIM domain only protein 7 isoform X15

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (4) summary
      cd00136
      Location:676 → 743
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1235 → 1293
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:261 → 408
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:851 → 1104
      DUF5401; Family of unknown function (DUF5401)

    18. XM_028837589.1 → XP_028693422.1  LIM domain only protein 7 isoform X9

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (4) summary
      cd00136
      Location:838 → 905
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1438 → 1496
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:423 → 570
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1054 → 1307
      DUF5401; Family of unknown function (DUF5401)

    19. XM_015121217.2 → XP_014976703.2  LIM domain only protein 7 isoform X9

      UniProtKB/TrEMBL
      H9FUD1
      Conserved Domains (4) summary
      cd00136
      Location:838 → 905
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      cd08368
      Location:1438 → 1496
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      pfam15949
      Location:423 → 570
      DUF4757; Domain of unknown function (DUF4757)
      pfam17380
      Location:1054 → 1307
      DUF5401; Family of unknown function (DUF5401)
    Nucleotide Protein
    Heading Accession and Version

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