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    RNF13 ring finger protein 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711339, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RNF13provided by VGNC
    Official Full Name
    ring finger protein 13provided by VGNC
    Primary source
    VGNC:VGNC:81557
    See related
    Ensembl:ENSMMUG00000023335
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RNF13 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (51944762..52101071)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (136560227..136716310)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 2 Neighboring gene U6 spliceosomal RNA Neighboring gene ankyrin repeat and ubiquitin domain containing 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106997027 Neighboring gene profilin 2 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      51944762..52101071
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015131793.2 → XP_014987279.1  E3 ubiquitin-protein ligase RNF13 isoform X2

      UniProtKB/TrEMBL
      F7EGQ3, H9ELX5
      Related
      ENSMMUP00000030713.3, ENSMMUT00000032825.4
      Conserved Domains (2) summary
      cd02123
      Location:23 → 180
      PA_C_RZF_like; PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like. This group includes various PA domain-containing proteins similar to C-RZF (chicken embryo RING zinc finger) protein. These proteins contain a C3H2C3 RING finger. C-RZF is expressed in embryo ...
      cd16797
      Location:238 → 283
      RING-H2_RNF167; RING finger, H2 subclass, found in RING finger protein 167 (RNF167) and similar proteins

    2. XM_015131791.2 → XP_014987277.1  E3 ubiquitin-protein ligase RNF13 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7Q2
      Related
      ENSMMUP00000044068.2, ENSMMUT00000060808.2
      Conserved Domains (2) summary
      cd02123
      Location:23 → 180
      PA_C_RZF_like; PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like. This group includes various PA domain-containing proteins similar to C-RZF (chicken embryo RING zinc finger) protein. These proteins contain a C3H2C3 RING finger. C-RZF is expressed in embryo ...
      pfam13639
      Location:261 → 305
      zf-RING_2; Ring finger domain

    3. XM_028843772.1 → XP_028699605.1  E3 ubiquitin-protein ligase RNF13 isoform X3

      Conserved Domains (3) summary
      cd00162
      Location:121 → 162
      RING_Ubox; RING-H2 finger (C3H2C3-type) [structural motif]
      cl28883
      Location:21 → 61
      PA; Protease-associated (PA) domain. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At ...
      cl17238
      Location:119 → 164
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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