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    DCN decorin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709933, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DCNprovided by VGNC
    Official Full Name
    decorinprovided by VGNC
    Primary source
    VGNC:VGNC:71748
    See related
    Ensembl:ENSMMUG00000016997
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DCN in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (90914795..90952424, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (90827732..90865805, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene lumican Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial-like Neighboring gene uncharacterized LOC107000983

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Decorin is a part of the ovarian extracellular matrix in primates and may act as a signaling molecule. Adam M, et al. Hum Reprod, 2012 Nov. PMID 22888166, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data indicate that decorin is involved in folliculogenesis/oogenesis, ovulation, and luteal phase support.
      Title: Decorin is a part of the ovarian extracellular matrix in primates and may act as a signaling molecule.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    decorin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      90914795..90952424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001104261.3 → XP_001104261.1  decorin

      See identical proteins and their annotated locations for XP_001104261.1

      UniProtKB/TrEMBL
      A0A8J8XUW0, F6PRM0, F6PRM5, G7N7Y2, H9FQN5
      Related
      ENSMMUP00000022356.2, ENSMMUT00000023885.4
      Conserved Domains (3) summary
      sd00033
      Location:62 → 82
      LRR_RI; leucine-rich repeat [structural motif]
      pfam01462
      Location:54 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      cl26018
      Location:70 → 298
      NEL; C-terminal novel E3 ligase, LRR-interacting

    2. XM_015152443.2 → XP_015007929.1  decorin

      UniProtKB/TrEMBL
      A0A8J8XUW0, F6PRM0, F6PRM5, G7N7Y2, H9FQN5
      Conserved Domains (3) summary
      sd00033
      Location:62 → 82
      LRR_RI; leucine-rich repeat [structural motif]
      pfam01462
      Location:54 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      cl26018
      Location:70 → 298
      NEL; C-terminal novel E3 ligase, LRR-interacting

    3. XM_015152442.2 → XP_015007928.1  decorin

      UniProtKB/TrEMBL
      A0A8J8XUW0, F6PRM0, F6PRM5, G7N7Y2, H9FQN5
      Related
      ENSMMUP00000022357.3, ENSMMUT00000023886.4
      Conserved Domains (3) summary
      sd00033
      Location:62 → 82
      LRR_RI; leucine-rich repeat [structural motif]
      pfam01462
      Location:54 → 80
      LRRNT; Leucine rich repeat N-terminal domain
      cl26018
      Location:70 → 298
      NEL; C-terminal novel E3 ligase, LRR-interacting
    Nucleotide Protein
    Heading Accession and Version

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