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    RNF180 ring finger protein 180 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698166, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RNF180provided by VGNC
    Official Full Name
    ring finger protein 180provided by VGNC
    Primary source
    VGNC:VGNC:76849
    See related
    Ensembl:ENSMMUG00000021130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RNF180 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (62674259..62901131)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (62303685..62527524)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678801 Neighboring gene 5-hydroxytryptamine receptor 1A Neighboring gene regulator of G protein signaling 7 binding protein Neighboring gene U6 spliceosomal RNA Neighboring gene shisa like 2B Neighboring gene SREK1 interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in norepinephrine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in serotonin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF180

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      62674259..62901131
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849464.1 → XP_028705297.1  E3 ubiquitin-protein ligase RNF180 isoform X6

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:431 → 474
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    2. XM_015140103.2 → XP_014995589.2  E3 ubiquitin-protein ligase RNF180 isoform X7

      UniProtKB/TrEMBL
      F7HE46, G7MU58
      Related
      ENSMMUP00000034627.3, ENSMMUT00000041602.3
      Conserved Domains (1) summary
      cd16554
      Location:431 → 474
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    3. XM_028849459.1 → XP_028705292.1  E3 ubiquitin-protein ligase RNF180 isoform X1

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:461 → 504
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    4. XM_028849463.1 → XP_028705296.1  E3 ubiquitin-protein ligase RNF180 isoform X4

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:461 → 504
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    5. XM_015140099.2 → XP_014995585.2  E3 ubiquitin-protein ligase RNF180 isoform X2

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:461 → 504
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    6. XM_015140102.2 → XP_014995588.2  E3 ubiquitin-protein ligase RNF180 isoform X5

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:461 → 504
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    7. XM_028849461.1 → XP_028705294.1  E3 ubiquitin-protein ligase RNF180 isoform X3

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:370 → 413
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    8. XM_028849462.1 → XP_028705295.1  E3 ubiquitin-protein ligase RNF180 isoform X3

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:370 → 413
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins

    9. XM_028849460.1 → XP_028705293.1  E3 ubiquitin-protein ligase RNF180 isoform X3

      UniProtKB/TrEMBL
      G7MU58
      Conserved Domains (1) summary
      cd16554
      Location:370 → 413
      RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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