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    RPL7 ribosomal protein L7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698049, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPL7provided by VGNC
    Official Full Name
    ribosomal protein L7provided by VGNC
    Primary source
    VGNC:VGNC:99475
    See related
    Ensembl:ENSMMUG00000005141
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RPL7 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (73796749..73799797, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (71537326..71540396, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L19 pseudogene Neighboring gene chromosome 8 C8orf89 homolog Neighboring gene peroxiredoxin-like 2A pseudogene Neighboring gene retinol dehydrogenase 10 Neighboring gene staufen double-stranded RNA binding protein 2 Neighboring gene homeobox protein VENTX pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein uL30; 60S ribosomal protein L7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193556.1 → NP_001180485.1  large ribosomal subunit protein uL30

      Status: VALIDATED

      Source sequence(s)
      CB309887, CN641541, DR772523
      UniProtKB/TrEMBL
      F7E6R8, G7MZJ9
      Related
      ENSMMUP00000028263.4, ENSMMUT00000030202.4
      Conserved Domains (1) summary
      TIGR01310
      Location:15 → 247
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      73796749..73799797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145510.2 → XP_015000996.1  60S ribosomal protein L7 isoform X1

      UniProtKB/TrEMBL
      F7DC09, G7MZJ9
      Related
      ENSMMUP00000006809.4, ENSMMUT00000007245.4
      Conserved Domains (3) summary
      cd01657
      Location:103 → 262
      Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...
      TIGR01310
      Location:30 → 262
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form
      pfam08079
      Location:31 → 101
      Ribosomal_L30_N; Ribosomal L30 N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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