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    XAF1 XIAP associated factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713425, updated on 17-Aug-2024

    Summary

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    Official Symbol
    XAF1provided by VGNC
    Official Full Name
    XIAP associated factor 1provided by VGNC
    Primary source
    VGNC:VGNC:99332
    Locus tag
    EGK_08092
    See related
    Ensembl:ENSMMUG00000009602
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See XAF1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (6510576..6528515)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (6708713..6727029)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 13 member 5 Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene uncharacterized LOC106993872 Neighboring gene F-box protein 39 Neighboring gene tektin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    XIAP-associated factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194803.2 → NP_001181732.1  XIAP-associated factor 1

      See identical proteins and their annotated locations for NP_001181732.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000155
      UniProtKB/TrEMBL
      A0A8J8YA39, F7AC39, G7NI67
      Related
      ENSMMUP00000012556.2, ENSMMUT00000013401.4
      Conserved Domains (1) summary
      PLN03086
      Location:7 → 108
      PLN03086; PRLI-interacting factor K; Provisional

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      6510576..6528515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835642.1 → XP_028691475.1  XIAP-associated factor 1 isoform X5

    2. XM_015118313.2 → XP_014973799.2  XIAP-associated factor 1 isoform X1

      Conserved Domains (1) summary
      PLN03086
      Location:7 → 127
      PLN03086; PRLI-interacting factor K; Provisional

    3. XM_015118316.2 → XP_014973802.2  XIAP-associated factor 1 isoform X3

      Conserved Domains (1) summary
      PLN03086
      Location:7 → 108
      PLN03086; PRLI-interacting factor K; Provisional

    4. XM_028835641.1 → XP_028691474.1  XIAP-associated factor 1 isoform X4

    5. XM_028835643.1 → XP_028691476.1  XIAP-associated factor 1 isoform X6

    6. XM_001103678.4 → XP_001103678.1  XIAP-associated factor 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q0P0
      Related
      ENSMMUP00000041602.1, ENSMMUT00000056601.2
      Conserved Domains (1) summary
      PLN03086
      Location:7 → 127
      PLN03086; PRLI-interacting factor K; Provisional
    Nucleotide Protein
    Heading Accession and Version

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