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    TCAF2 TRPM8 channel associated factor 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707579, updated on 5-Mar-2024

    Summary

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    Gene symbol
    TCAF2
    Gene description
    TRPM8 channel associated factor 2
    See related
    Ensembl:ENSMMUG00000013955
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM115C
    Orthologs
    human mouse all
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    Genomic context

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    See TCAF2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (170246436..170274057, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (175341006..175368881)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene cTAGE family member 15-like Neighboring gene TRPM8 channel associated factor 1 Neighboring gene olfactory receptor 2F2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of anion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TRPM8 channel-associated factor 2
    Names
    family with sequence similarity 115, member C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193948.2 → NP_001180877.2  TRPM8 channel-associated factor 2

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000312
      UniProtKB/TrEMBL
      F6S7P5
      Related
      ENSMMUP00000018341.4, ENSMMUT00000019586.4
      Conserved Domains (2) summary
      pfam13402
      Location:633 → 835
      Peptidase_M60; Peptidase M60, enhancin and enhancin-like
      pfam17291
      Location:524 → 632
      M60-like_N; N-terminal domain of M60-like peptidases

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      170246436..170274057 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015135135.2 → XP_014990621.2  TRPM8 channel-associated factor 2 isoform X2

      UniProtKB/TrEMBL
      G8F1Z0
      Conserved Domains (2) summary
      pfam13402
      Location:558 → 814
      Peptidase_M60; Peptidase M60, enhancin and enhancin-like
      pfam17291
      Location:449 → 557
      M60-like_N; N-terminal domain of M60-like peptidases

    2. XM_015135136.2 → XP_014990622.2  TRPM8 channel-associated factor 2 isoform X3

      Conserved Domains (2) summary
      pfam13402
      Location:643 → 809
      Peptidase_M60; Peptidase M60, enhancin and enhancin-like
      pfam17291
      Location:524 → 632
      M60-like_N; N-terminal domain of M60-like peptidases

    3. XM_015135134.2 → XP_014990620.2  TRPM8 channel-associated factor 2 isoform X1

      UniProtKB/TrEMBL
      F6S7K5
      Related
      ENSMMUP00000018344.4, ENSMMUT00000019589.4
      Conserved Domains (2) summary
      pfam13402
      Location:633 → 889
      Peptidase_M60; Peptidase M60, enhancin and enhancin-like
      pfam17291
      Location:524 → 632
      M60-like_N; N-terminal domain of M60-like peptidases

    4. XM_028844956.1 → XP_028700789.1  TRPM8 channel-associated factor 2 isoform X4

      UniProtKB/TrEMBL
      G8F1Z0
      Conserved Domains (2) summary
      pfam13402
      Location:352 → 608
      Peptidase_M60; Peptidase M60, enhancin and enhancin-like
      pfam17291
      Location:243 → 351
      M60-like_N; N-terminal domain of M60-like peptidases

    RNA

    1. XR_003727732.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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