U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TATDN3 TatD DNase domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715769, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TATDN3provided by VGNC
    Official Full Name
    TatD DNase domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:78223
    Locus tag
    EGK_01670
    See related
    Ensembl:ENSMMUG00000031430
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TATDN3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (70267031..70292690)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (153718009..153743659, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene NSL1 component of MIS12 kinetochore complex Neighboring gene uncharacterized LOC106993671 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene 40S ribosomal protein S5 pseudogene Neighboring gene spermatogenesis associated 45 Neighboring gene 40S ribosomal protein S28 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative deoxyribonuclease TATDN3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      70267031..70292690
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117166.2 → XP_014972652.1  putative deoxyribonuclease TATDN3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q040, A0A8J8XKZ5, F7GUS5, G7MEL3
      Related
      ENSMMUP00000041402.1, ENSMMUT00000078255.2
      Conserved Domains (1) summary
      pfam01026
      Location:9 → 265
      TatD_DNase; TatD related DNase

    2. XM_015117170.2 → XP_014972656.1  putative deoxyribonuclease TATDN3 isoform X2

      UniProtKB/TrEMBL
      F7GUS5
      Conserved Domains (1) summary
      pfam01026
      Location:9 → 264
      TatD_DNase; TatD related DNase

    3. XM_015117173.2 → XP_014972659.1  putative deoxyribonuclease TATDN3 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QQ86, F7GUS5
      Related
      ENSMMUP00000050213.2, ENSMMUT00000063673.2
      Conserved Domains (1) summary
      pfam01026
      Location:9 → 238
      TatD_DNase; TatD related DNase

    4. XM_028853074.1 → XP_028708907.1  putative deoxyribonuclease TATDN3 isoform X6

      Conserved Domains (1) summary
      cl00281
      Location:8 → 161
      metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...

    5. XM_015117184.2 → XP_014972670.1  putative deoxyribonuclease TATDN3 isoform X5

      UniProtKB/TrEMBL
      F7GUS5
      Conserved Domains (1) summary
      COG0084
      Location:8 → 214
      TatD; Tat protein secretion system quality control protein TatD (DNase activity) [Cell motility]

    6. XM_015117181.2 → XP_014972667.1  putative deoxyribonuclease TATDN3 isoform X4

      UniProtKB/TrEMBL
      F7GUS5
      Conserved Domains (1) summary
      pfam01026
      Location:8 → 216
      TatD_DNase; TatD related DNase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.