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    CTDSPL2 CTD small phosphatase like 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711917, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CTDSPL2provided by VGNC
    Official Full Name
    CTD small phosphatase like 2provided by VGNC
    Primary source
    VGNC:VGNC:71593
    See related
    Ensembl:ENSMMUG00000016742
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CTDSPL2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (20926365..21034783)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (20798579..20909048)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene FERM domain containing 5 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene golgi membrane protein 2 Neighboring gene heterogeneous nuclear ribonucleoprotein M pseudogene Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene uncharacterized LOC114679390 Neighboring gene eukaryotic translation initiation factor 3 subunit J Neighboring gene SPG11 vesicle trafficking associated, spatacsin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoprotein phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CTD small phosphatase-like protein 2
    Names
    CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
    NP_001253738.1
    XP_014997579.1
    XP_028706277.1
    XP_028706278.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266809.1 → NP_001253738.1  CTD small phosphatase-like protein 2

      See identical proteins and their annotated locations for NP_001253738.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047313
      UniProtKB/TrEMBL
      F7APY5, G7MX71
      Related
      ENSMMUP00000022006.2, ENSMMUT00000023521.4
      Conserved Domains (1) summary
      TIGR02251
      Location:287 → 448
      HIF-SF_euk; Dullard-like phosphatase domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      20926365..21034783
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850445.1 → XP_028706278.1  CTD small phosphatase-like protein 2 isoform X2

      UniProtKB/TrEMBL
      G7MX71
      Conserved Domains (1) summary
      TIGR02251
      Location:286 → 447
      HIF-SF_euk; Dullard-like phosphatase domain

    2. XM_015142093.2 → XP_014997579.1  CTD small phosphatase-like protein 2 isoform X1

      UniProtKB/TrEMBL
      F7APY5, G7MX71
      Conserved Domains (1) summary
      TIGR02251
      Location:287 → 448
      HIF-SF_euk; Dullard-like phosphatase domain

    3. XM_028850444.1 → XP_028706277.1  CTD small phosphatase-like protein 2 isoform X1

      UniProtKB/TrEMBL
      F7APY5, G7MX71
      Conserved Domains (1) summary
      TIGR02251
      Location:287 → 448
      HIF-SF_euk; Dullard-like phosphatase domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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