U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    VGLL3 vestigial like family member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719328, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    VGLL3provided by VGNC
    Official Full Name
    vestigial like family member 3provided by VGNC
    Primary source
    VGNC:VGNC:79430
    See related
    Ensembl:ENSMMUG00000000519
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See VGLL3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (185036509..185087026)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (11727439..11777576, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 2B Neighboring gene uncharacterized LOC114676165 Neighboring gene uncharacterized LOC106995695 Neighboring gene uncharacterized LOC106995783 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transcription cofactor vestigial-like protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      185036509..185087026
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015129166.2 → XP_014984652.1  transcription cofactor vestigial-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QY02, G7MJT4
      Conserved Domains (1) summary
      pfam07545
      Location:84 → 114
      Vg_Tdu; Vestigial/Tondu family

    2. XM_028844720.1 → XP_028700553.1  transcription cofactor vestigial-like protein 3 isoform X2

      UniProtKB/TrEMBL
      G7MJT4
      Conserved Domains (1) summary
      pfam07545
      Location:83 → 113
      Vg_Tdu; Vestigial/Tondu family

    3. XM_001104200.4 → XP_001104200.1  transcription cofactor vestigial-like protein 3 isoform X1

      See identical proteins and their annotated locations for XP_001104200.1

      UniProtKB/TrEMBL
      A0A1D5QY02, G7MJT4
      Related
      ENSMMUP00000052932.1, ENSMMUT00000058428.2
      Conserved Domains (1) summary
      pfam07545
      Location:84 → 114
      Vg_Tdu; Vestigial/Tondu family

    4. XM_028844721.1 → XP_028700554.1  transcription cofactor vestigial-like protein 3 isoform X3

      UniProtKB/TrEMBL
      G7MJT4
      Conserved Domains (1) summary
      pfam07545
      Location:42 → 59
      Vg_Tdu; Vestigial/Tondu family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials