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    PRRT1 proline rich transmembrane protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717111, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PRRT1provided by VGNC
    Official Full Name
    proline rich transmembrane protein 1provided by VGNC
    Primary source
    VGNC:VGNC:83449
    See related
    Ensembl:ENSMMUG00000016647
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PRRT1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (137351675..137357318)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (32992459..32995683, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 5 Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 1 Neighboring gene EGF like domain multiple 8 Neighboring gene palmitoyl-protein thioesterase 2 Neighboring gene FKBP prolyl isomerase like Neighboring gene activating transcription factor 6 beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proline-rich transmembrane protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257898.1 → NP_001244827.1  proline-rich transmembrane protein 1

      See identical proteins and their annotated locations for NP_001244827.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320735
      UniProtKB/TrEMBL
      F6TP18, F6UY02, H9EQ32
      Related
      ENSMMUP00000021891.4, ENSMMUT00000023395.4
      Conserved Domains (1) summary
      pfam04505
      Location:219 → 286
      CD225; Interferon-induced transmembrane protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      137351675..137357318
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028846852.1 → XP_028702685.1  proline-rich transmembrane protein 1 isoform X1

      UniProtKB/TrEMBL
      F6TP18, F6UY02, H9EQ32
      Related
      ENSMMUP00000033998.3, ENSMMUT00000040970.3
      Conserved Domains (1) summary
      pfam04505
      Location:219 → 286
      CD225; Interferon-induced transmembrane protein
    Nucleotide Protein
    Heading Accession and Version

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