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    CTSA cathepsin A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708592, updated on 3-Dec-2024

    Summary

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    Official Symbol
    CTSAprovided by VGNC
    Official Full Name
    cathepsin Aprovided by VGNC
    Primary source
    VGNC:VGNC:71617
    Locus tag
    EGK_02341
    See related
    Ensembl:ENSMMUG00000009960
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PPGB
    Orthologs
    human mouse all
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    Genomic context

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    See CTSA in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (81072229..81094649)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (18600097..18622551, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene zinc finger SWIM-type containing 1 Neighboring gene spermatogenesis associated 25 Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene phospholipid transfer protein Neighboring gene phosphorylated CTD interacting factor 1 Neighboring gene zinc finger protein 335 Neighboring gene matrix metallopeptidase 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysosomal protective protein
    Names
    protective protein for beta-galactosidase
    XP_015004308.1
    XP_015004309.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001434456.1 → NP_001421385.1  lysosomal protective protein precursor

      Status: VALIDATED

      Source sequence(s)
      QNVO02000030
      UniProtKB/TrEMBL
      F6RBN1, G7N4N3

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      81072229..81094649
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148823.2 → XP_015004309.1  lysosomal protective protein isoform X1

      UniProtKB/TrEMBL
      F6RBN1, G7N4N3
      Conserved Domains (1) summary
      pfam00450
      Location:35 → 472
      Peptidase_S10; Serine carboxypeptidase

    2. XM_015148822.2 → XP_015004308.1  lysosomal protective protein isoform X1

      UniProtKB/TrEMBL
      F6RBN1, G7N4N3
      Related
      ENSMMUP00000013028.4, ENSMMUT00000013904.4
      Conserved Domains (1) summary
      pfam00450
      Location:35 → 472
      Peptidase_S10; Serine carboxypeptidase

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001266851.1: Suppressed sequence

      Description
      NM_001266851.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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