U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ARMC6 armadillo repeat containing 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 720316, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ARMC6provided by VGNC
    Official Full Name
    armadillo repeat containing 6provided by VGNC
    Primary source
    VGNC:VGNC:69899
    See related
    Ensembl:ENSMMUG00000019668
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ARMC6 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (18613357..18639701)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (19144724..19151022)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene COPI coat complex subunit epsilon Neighboring gene uncharacterized LOC106994666 Neighboring gene DEAD-box helicase 49 Neighboring gene homer scaffold protein 3 Neighboring gene SURP and G-patch domain containing 2 Neighboring gene solute carrier family 25 member 42 Neighboring gene transmembrane protein 161A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hematopoietic progenitor cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    armadillo repeat-containing protein 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001190905.2 → NP_001177834.2  armadillo repeat-containing protein 6

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000224
      UniProtKB/TrEMBL
      F6ZCP4, G7NNG0
      Related
      ENSMMUP00000031728.3, ENSMMUT00000038638.3
      Conserved Domains (2) summary
      smart00185
      Location:184 → 226
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:146 → 180
      ARM; armadillo repeat [structural motif]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      18613357..18639701
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028838558.1 → XP_028694391.1  armadillo repeat-containing protein 6 isoform X3

      UniProtKB/TrEMBL
      F6ZCP4, G7NNG0
      Conserved Domains (2) summary
      smart00185
      Location:184 → 226
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:146 → 180
      ARM; armadillo repeat [structural motif]

    2. XM_028838560.1 → XP_028694393.1  armadillo repeat-containing protein 6 isoform X4

      UniProtKB/TrEMBL
      A0A1D5RDA9
      Related
      ENSMMUP00000079421.1, ENSMMUT00000088013.1
      Conserved Domains (2) summary
      smart00185
      Location:184 → 226
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:288 → 321
      ARM; armadillo repeat [structural motif]

    3. XM_028838555.1 → XP_028694388.1  armadillo repeat-containing protein 6 isoform X1

      UniProtKB/TrEMBL
      F6ZCP4
      Conserved Domains (2) summary
      smart00185
      Location:221 → 263
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:183 → 217
      ARM; armadillo repeat [structural motif]

    4. XM_028838557.1 → XP_028694390.1  armadillo repeat-containing protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZP79, F6ZCP4
      Related
      ENSMMUP00000066428.1, ENSMMUT00000092414.1
      Conserved Domains (2) summary
      smart00185
      Location:221 → 263
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:325 → 358
      ARM; armadillo repeat [structural motif]

    5. XM_028838559.1 → XP_028694392.1  armadillo repeat-containing protein 6 isoform X4

      UniProtKB/TrEMBL
      A0A1D5RDA9
      Conserved Domains (2) summary
      smart00185
      Location:184 → 226
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:288 → 321
      ARM; armadillo repeat [structural motif]

    6. XM_028838556.1 → XP_028694389.1  armadillo repeat-containing protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZP79, F6ZCP4
      Conserved Domains (2) summary
      smart00185
      Location:221 → 263
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:325 → 358
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.