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    FAT1 FAT atypical cadherin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702800, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FAT1provided by VGNC
    Official Full Name
    FAT atypical cadherin 1provided by VGNC
    Primary source
    VGNC:VGNC:72617
    See related
    Ensembl:ENSMMUG00000018051
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAT
    Orthologs
    human mouse all
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    Genomic context

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    See FAT1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (183857654..184003722, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (187084248..187225971, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678458 Neighboring gene U6 spliceosomal RNA Neighboring gene melatonin receptor 1A Neighboring gene uncharacterized LOC114678459 Neighboring gene uncharacterized LOC114678460 Neighboring gene uncharacterized LOC114678461

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protocadherin Fat 1
    Names
    FAT tumor suppressor homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      183857654..184003722 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015139655.2 → XP_014995141.2  protocadherin Fat 1 isoform X1

      UniProtKB/TrEMBL
      F7HLC0, H9EX18
      Related
      ENSMMUP00000034440.3, ENSMMUT00000041413.3
      Conserved Domains (4) summary
      cd11304
      Location:3257 → 3354
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3877 → 4008
      LamG; Laminin G domain
      cd00054
      Location:4150 → 4186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4116 → 4146
      EGF; EGF-like domain

    2. XM_015139657.2 → XP_014995143.2  protocadherin Fat 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZEQ5, H9EX18
      Related
      ENSMMUP00000063666.1, ENSMMUT00000082525.1
      Conserved Domains (4) summary
      cd11304
      Location:3234 → 3331
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3854 → 3985
      LamG; Laminin G domain
      cd00054
      Location:4127 → 4163
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4093 → 4123
      EGF; EGF-like domain

    3. XM_015139658.2 → XP_014995144.2  protocadherin Fat 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A5J7, H9EX18
      Related
      ENSMMUP00000073215.1, ENSMMUT00000100855.1
      Conserved Domains (4) summary
      cd11304
      Location:3257 → 3354
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3877 → 4008
      LamG; Laminin G domain
      cd00054
      Location:4150 → 4186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4116 → 4146
      EGF; EGF-like domain

    4. XM_015139656.2 → XP_014995142.2  protocadherin Fat 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZSW4, H9EX18
      Related
      ENSMMUP00000067742.1, ENSMMUT00000087703.1
      Conserved Domains (4) summary
      cd11304
      Location:3257 → 3354
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3877 → 4008
      LamG; Laminin G domain
      cd00054
      Location:4150 → 4186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4116 → 4146
      EGF; EGF-like domain

    5. XM_015139661.2 → XP_014995147.2  protocadherin Fat 1 isoform X6

      UniProtKB/TrEMBL
      A0A5F7ZBZ5
      Conserved Domains (4) summary
      cd11304
      Location:3257 → 3354
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3877 → 4008
      LamG; Laminin G domain
      cd00054
      Location:4150 → 4186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4116 → 4146
      EGF; EGF-like domain

    6. XM_015139654.2 → XP_014995140.2  protocadherin Fat 1 isoform X1

      UniProtKB/TrEMBL
      F7HLC0, H9EX18
      Conserved Domains (4) summary
      cd11304
      Location:3257 → 3354
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3877 → 4008
      LamG; Laminin G domain
      cd00054
      Location:4150 → 4186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4116 → 4146
      EGF; EGF-like domain

    7. XM_015139660.2 → XP_014995146.2  protocadherin Fat 1 isoform X5

      UniProtKB/TrEMBL
      H9EX18
      Conserved Domains (4) summary
      cd11304
      Location:3234 → 3331
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00282
      Location:3854 → 3985
      LamG; Laminin G domain
      cd00054
      Location:4127 → 4163
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      pfam00008
      Location:4093 → 4123
      EGF; EGF-like domain

    RNA

    1. XR_003729905.1 RNA Sequence

    2. XR_003729906.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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