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    CIB1 calcium and integrin binding 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701842, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CIB1provided by VGNC
    Official Full Name
    calcium and integrin binding 1provided by VGNC
    Primary source
    VGNC:VGNC:71189
    Locus tag
    EGK_17830
    See related
    Ensembl:ENSMMUG00000004376
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CIB1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (69024082..69027952, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (68286135..68289969, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene semaphorin 4B Neighboring gene 40S ribosomal protein S12 pseudogene Neighboring gene uncharacterized LOC100425200 Neighboring gene GDP-D-glucose phosphorylase 1 Neighboring gene tubulin polyglutamylase TTLL13P

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium and integrin-binding protein 1
    Names
    calcium and integrin binding 1 (calmyrin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      69024082..69027952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143017.2 → XP_014998503.1  calcium and integrin-binding protein 1 isoform X3

      Conserved Domains (1) summary
      cd00051
      Location:162 → 225
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

    2. XM_001096008.4 → XP_001096008.2  calcium and integrin-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QDE1, A0A5K1U1C0, A0A663D6A7, A0A8J8YCI1, F7FRX2, G7MVY1
      Related
      ENSMMUP00000046060.2, ENSMMUT00000075356.2
      Conserved Domains (1) summary
      cl25352
      Location:67 → 182
      EFh_PEF; The penta-EF hand (PEF) family

    3. XM_015143015.2 → XP_014998501.1  calcium and integrin-binding protein 1 isoform X1

      Conserved Domains (2) summary
      cd00051
      Location:162 → 225
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      pfam13499
      Location:161 → 224
      EF-hand_7; EF-hand domain pair

    4. XM_015143016.2 → XP_014998502.1  calcium and integrin-binding protein 1 isoform X2

      Conserved Domains (1) summary
      COG5126
      Location:67 → 182
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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